pcnB:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0142, b0143, JW5808''<ref name='LIB:Riley_2006'/>
''ECK0142, b0143, JW5808''<ref name='LIB:Riley_2006'/>, JW5808''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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poly(A) polymerase I<ref name='LIB:Riley_2006'/>, B0143<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PcnB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PAP I<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''poly(A) polymerase I<ref name='LIB:Riley_2006'/>, B0143<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PcnB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PAP I<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0142, JW5808, b0143''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=pcnB&loc=MG1655:159126..157729,W3110:159126..157729,DH10B:133230..131833,REL606:161944..160580 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=161944&end=160580&gene=pcnB&aa=mlsreeseaeqavarpqvtvipreqhaisrkdisenalkvmyrlnkagyeawlvgggvrdlllgkkpkdfdvttnatpeqvrklfrncrlvgrrfrlahvmfgpeiievatfrghhegnvsdrttsqrgqngmllrdnifgsieedaqrrdftinslyysvadftvrdyvggmkdlkdgvirlignpetryredpvrmlravrfaaklgmrispetaepiprlatllndipparlfeeslkllqagygyetykllceyhlfqplfptitryftengdspmeriieqvlkntdtrihndmrvnpaflfaamfwyplletaqkiaqesgltyhdafalamndvldeacrslaipkrlttltrdiwqlqlrmsrrqgkrawkllehpkfraaydllalraevernaelqrlvkwwgefqvsappdqkgmlneldeepsprrrtrrprkraprregta Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=pcnB+AND+escherichia+coli Pubmed(pcnB)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/dev/search?q=pcnB Textpresso(pcnB)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=pcnB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10690]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000683&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=pcnB&loc=MG1655%3A159126..157729,W3110%3A159126..157729,DH10B%3A133230..131833,REL606%3A161944..160580,BW2952%3A157728..159125]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=157728&end=159125&gene=pcnB&aa=mlsreeseaeqavarpqvtvipreqhaisrkdisenalkvmyrlnkagyeawlvgggvrdlllgkkpkdfdvttnatpeqvrklfrncrlvgrrfrlahvmfgpeiievatfrghhegnvsdrttsqrgqngmllrdnifgsieedaqrrdftinslyysvadftvrdyvggmkdlkdgvirlignpetryredpvrmlravrfaaklgmrispetaepiprlatllndipparlfeeslkllqagygyetykllceyhlfqplfptitryftengdspmeriieqvlkntdtrihndmrvnpaflfaamfwyplletaqkiaqesgltyhdafalamndvldeacrslaipkrlttltrdiwqlqlrmsrrqgkrawkllehpkfraaydllalraevernaelqrlvkwwgefqvsappdqkgmlneldeepsprrrtrrprkraprregta]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=pcnB+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=pcnB]]&nbsp;&nbsp;


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Latest revision as of 21:47, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

pcnB

Gene Synonym(s)

ECK0142, b0143, JW5808[1], JW5808

Product Desc.

poly(A) polymerase I[2][3]

Poly(A) polymerase; controls plasmid copy number; rare AUU start codon, growth-rate regulated; monomeric[4]

Product Synonyms(s)

poly(A) polymerase I[1], B0143[2][1], PcnB[2][1], PAP I[2][1] , ECK0142, JW5808, b0143

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): pcnB-folK[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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AUU start proven by mutagenesis analysis. PcnB can polyadenylate many mRNAs and it is proposed that Rho-independent transcription terminators serve as polyadenylation signals (Mohanty, 2006).[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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