pbpC:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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{|  id="D49aeef3799132"  class=" tableEdit New_Quickview_Table"   
{|  id="D49aeef3799132"  class=" tableEdit New_Quickview_Table"   


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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK2515, b2519, JW2503, yfgN''<ref name='LIB:Riley_2006'/>
''ECK2515, b2519, JW2503, yfgN''<ref name='LIB:Riley_2006'/>, yfgN''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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fused transglycosylase<ref name='LIB:Riley_2006'/>, transpeptidase<ref name='LIB:Riley_2006'/>, B2519<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YfgN<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PbpC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PBP1C<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''fused transglycosylase<ref name='LIB:Riley_2006'/>, transpeptidase<ref name='LIB:Riley_2006'/>, B2519<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YfgN<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PbpC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PBP1C<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2515, JW2503, yfgN, b2519''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=pbpC&loc=MG1655:2645347..2643035,W3110:2645981..2643669,REL606:2568144..2565832,DH10B:2737112..2734800 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2737112&end=2734800&gene=pbpC&aa=mprlltkrgcwitlaaapfllflaawgadklwplplhevnparvvvaqdgtplwrfadadgiwrypvtiedvsprylealinyedrwfwkhpgvnpfsvaraawqdltsgrvisggstltmqvarlldphpktfggkirqlwralqlewhlskreiltlylnrapfggtlqgigaaswaylgkspanlsyseaamlavlpqapsrlrpdrwperaeaarnkvlermavqgvwsreqvkesreepiwlaprqmpqlaplfsrmmlgksksdkitttldaglqrrleelaqnwkgrlpprsslamivvdhtdmrvrgwvgsvdlnddsrfghvdmvnsirspgsvlkpfvyglaldeglihpasllqdvprrtgdyrpgnfdsgfhgpismsealvrslnlpavqvleaygpkrfaaklrnvglplylpngaapnlslilggagakledmaaaytafarhgkagklrlqpddpllerplmssgaawiirrimadeaqplpdsalprvaplawktgtsygyrdawaigvnaryvigiwtgrpdgtpvvgqfgfasavpllnqvnnillsrsanlpedprpnsvtrgvicwpggqslpegdgncrrrlatwlldgsqpptlllpeqegingirfpiwldengkrvaadcpqarqeminvwplplepwlpaserravrlppastscppyghdaqlplqltgvrdgaiikrlpgaaeatlplqssggagerwwflngepltergrnvtlhltdkgdyqllvmddvgqiatvkfvmq Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=pbpC+AND+escherichia+coli Pubmed(pbpC)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/dev/search?q=pbpC Textpresso(pbpC)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=pbpC&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7322]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003894&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=pbpC&loc=MG1655%3A2645347..2643035,W3110%3A2645981..2643669,REL606%3A2568144..2565832,DH10B%3A2737112..2734800,BW2952%3A2528840..2531152]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2528840&end=2531152&gene=pbpC&aa=mprlltkrgcwitlaaapfllflaawgadklwplplhevnparvvvaqdgtplwrfadadgiwrypvtiedvsprylealinyedrwfwkhpgvnpfsvaraawqdltsgrvisggstltmqvarlldphpktfggkirqlwralqlewhlskreiltlylnrapfggtlqgigaaswaylgkspanlsyseaamlavlpqapsrlrpdrwperaeaarnkvlermavqgvwsreqvkesreepiwlaprqmpqlaplfsrmmlgksksdkitttldaglqrrleelaqnwkgrlpprsslamivvdhtdmrvrgwvgsvdlnddsrfghvdmvnsirspgsvlkpfvyglaldeglihpasllqdvprrtgdyrpgnfdsgfhgpismsealvrslnlpavqvleaygpkrfaaklrnvglplylpngaapnlslilggagakledmaaaytafarhgkagklrlqpddpllerplmssgaawiirrimadeaqplpdsalprvaplawktgtsygyrdawaigvnaryvigiwtgrpdgtpvvgqfgfasavpllnqvnnillsrsanlpedprpnsvtrgvicwpggqslpegdgncrrrlatwlldgsqpptlllpeqegingirfpiwldengkrvaadcpqarqeminvwplplepwlpaserravrlppastscppyghdaqlplqltgvrdgaiikrlpgaaeatlplqssggagerwwflngepltergrnvtlhltdkgdyqllvmddvgqiatvkfvmq]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=pbpC+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=pbpC]]&nbsp;&nbsp;


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Latest revision as of 21:47, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

pbpC

Gene Synonym(s)

ECK2515, b2519, JW2503, yfgN[1], yfgN

Product Desc.

putative peptidoglycan enzyme[2][3]

Penicillin-binding protein PBP1C murein transglycosylase[4]

Product Synonyms(s)

fused transglycosylase[1], transpeptidase[1], B2519[2][1], YfgN[2][1], PbpC[2][1], PBP1C[2][1] , ECK2515, JW2503, yfgN, b2519

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): pbpC[2]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


PbpC has a penicillin-insensitive transglycosylase N-terminal domain. PbpC has a transpeptidase-like C-terminal domain that does not seem to be functional. PbpC is a membrane-bound periplasmic enzyme that has an uncleaved signal anchor[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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