metF:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF02219 PFAM:PF02219]
[http://pfam.janelia.org/family/PF02219 PF02219 Methylenetetrahydrofolate reductase]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=51730 SUPERFAMILY:51730]
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[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21091:SF1 PTHR21091:SF1]
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[[EcoCyc]]
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EcoCyc:EG10585
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10585
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000578
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0580
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0012897
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:37, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000027924 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT3G59970 (score: 1.000; bootstrap: 100%)
  • AT2G44160 (score: 0.877)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000027586 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00033813 (score: 1.000; bootstrap: 100%)
  • WBGene00033814 (score: 0.332)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00015512 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000024357 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000013160 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0230137 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA20440-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000007330 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000315965 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000010283 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000013738 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Mus musculus

  • MGI:106639 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q75GR7 (score: 1.000; bootstrap: 100%)
  • Q75HE6 (score: 1.000; bootstrap: 100%)
  • Q9SE94 (score: 0.924)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000000294 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000011384 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YGL125W (score: 1.000; bootstrap: 100%)
  • YPL023C (score: 0.246)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAC56F80 (score: 1.000; bootstrap: 100%)
  • SPAC3430 (score: 0.244)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000177703 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00004910001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000014125 (score: 1.000; bootstrap: 90%)

From Inparanoid:20070104

Shigella flexneri

METF

From SHIGELLACYC

E. coli O157

METF

From ECOO157CYC

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF02219 Methylenetetrahydrofolate reductase

Superfamily (EcoliWiki Page)

SUPERFAMILY:51730

Panther (EcoliWiki Page)

PTHR21091:SF1

EcoCyc

EcoCyc:EG10585

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10585

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000578

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0580

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0012897

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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