icd:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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{|  id="J49aee9bdd08ce"  class=" tableEdit New_Quickview_Table"   
{|  id="J49aee9bdd08ce"  class=" tableEdit New_Quickview_Table"   


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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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e14 prophage; isocitrate dehydrogenase, specific for NADP+<ref name='LIB:Riley_2006'/>, B1136<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Icd<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, IcdE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, IcdA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''e14 prophage; isocitrate dehydrogenase, specific for NADP+<ref name='LIB:Riley_2006'/>, B1136<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Icd<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, IcdE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, IcdA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1122, icdA, icdE, JW1122, b1136''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=icd&loc=MG1655:1194346..1195596,W3110:1196700..1197950,DH10B:1249791..1251041,REL606:1210492..1211742 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1210492&end=1211742&gene=icd&aa=meskvvvpaqgkkitlqngklnvpenpiipyiegdgigvdvtpamlkvvdaavekaykgerkiswmeiytgekstqvygqdvwlpaetldlireyrvaikgplttpvgggirslnvalrqeldlyiclrpvryyqgtpspvkhpeltdmvifrensediyagiewkadsadaekvikflreemgvkkirfpehcgigikpcseegtkrlvraaieyaiandrdsvtlvhkgnimkftegafkdwgyqlareefggelidggpwlkvknpntgkeivikdviadaflqqillrpaeydviacmnlngdyisdalaaqvggigiapganigdecalfeathgtapkyagqdkvnpgsiilsaemmlrhmgwteaadlivkgmegainaktvtydferlmdgakllkcsefgdaiienm Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=icd+AND+escherichia+coli Pubmed(icd)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/dev/search?q=icd Textpresso(icd)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=icd&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10489]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000482&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=icd&loc=MG1655%3A1194346..1195596,W3110%3A1196700..1197950,DH10B%3A1249791..1251041,REL606%3A1210492..1211742,BW2952%3A1098271..1099521]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1098271&end=1099521&gene=icd&aa=meskvvvpaqgkkitlqngklnvpenpiipyiegdgigvdvtpamlkvvdaavekaykgerkiswmeiytgekstqvygqdvwlpaetldlireyrvaikgplttpvgggirslnvalrqeldlyiclrpvryyqgtpspvkhpeltdmvifrensediyagiewkadsadaekvikflreemgvkkirfpehcgigikpcseegtkrlvraaieyaiandrdsvtlvhkgnimkftegafkdwgyqlareefggelidggpwlkvknpntgkeivikdviadaflqqillrpaeydviacmnlngdyisdalaaqvggigiapganigdecalfeathgtapkyagqdkvnpgsiilsaemmlrhmgwteaadlivkgmegainaktvtydferlmdgakllkcsefgdaiienm]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=icd+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=icd]]&nbsp;&nbsp;


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Latest revision as of 21:49, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

icd

Gene Synonym(s)

ECK1122, b1136, JW1122, icdA, icdE, icdR[1]

Product Desc.

Icd[2][3];

Component of isocitrate dehydrogenase[2][3]

Isocitrate dehydrogenase, NADP+-specific; e14 attachment site[4]

Product Synonyms(s)

e14 prophage; isocitrate dehydrogenase, specific for NADP+[1], B1136[2][1], Icd[2][1], IcdE[2][1], IcdA[2][1] , ECK1122, icdA, icdE, JW1122, b1136

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): icd[2], OP00148

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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This icd allele has a C-terminus added during prophage e14 integration at codon 362, introducing 2 amino acid changes in icd. icdC encodes the original C-terminus of icd. Binds TrxA (Kumar, 2004).[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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