yhjK:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK3514, b3529, JW5943''<ref name='LIB:Riley_2006'/>
''ECK3514, b3529, JW5943''<ref name='LIB:Riley_2006'/>, JW5943''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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predicted diguanylate cyclase<ref name='LIB:Riley_2006'/>, B3529<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhjK<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''predicted diguanylate cyclase<ref name='LIB:Riley_2006'/>, B3529<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhjK<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3514, JW5943, b3529''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=yhjK&loc=MG1655:3683602..3681653,W3110:3954836..3956785,DH10B:3781347..3779398,REL606:3615071..3613122 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3615071&end=3613122&gene=yhjK&aa=mamvaavvlvfvfifctvllfhlvqqnryntatqlesiarsvreplssailkgdipeaeailasikpagvvsradvvlpnqfqalrksfiperpvpvmvtrlfelpvqislgvyslerpanpqpiaylvlqadsfrmykfvmstlstlvtiylllsliltvaiswcinrlilhplrniarelnaipakelvghqlalprlhqddeigmlvrsynlnqqllqrhyeeqnenamrfpvsdlpnkallmemleqvvarkqttalmiitcetlrdtagvlkeaqreillltlveklksvlsprmilaqisgydfaviangvqepwhaitlgqqvltimserlpieriqlrphcsigvamfygdltaeqlysraisaaftarhkgknqiqffdpqqmeaaqkrlteesdilnalenhqfaiwlqpqvemtsgklvsaevllriqqpdgswdlpdglidrieccglmvtvghwvleescrllaawqergimlplsvnlsalqlmhpnmvadmlelltryriqpgtlilevtesrriddphaavailrplrnagvrvalddfgmgyaglrqlqhmkslpidvlkidkmfveglpgdssmiaaiimlaqslnlqmiaegveteaqrdwlakagvgiaqgflfarplpieifeesyleek Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yhjK+AND+escherichia+coli Pubmed(yhjK)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/dev/search?q=yhjK Textpresso(yhjK)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=yhjK&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG12256]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002137&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=yhjK&loc=MG1655%3A3683602..3681653,W3110%3A3954836..3956785,DH10B%3A3781347..3779398,REL606%3A3615071..3613122,BW2952%3A3570147..3572102]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3570147&end=3572102&gene=yhjK&aa=mamvaavvlvfvfifctvllfhlvqqnryntatqlesiarsvreplssailkgdipeaeailasikpagvvsradvvlpnqfqalrksfiperpvpvmvtrlfelpvqislgvyslerpanpqpiaylvlqadsfrmykfvmstlstlvtiylllsliltvaiswcinrlilhplrniarelnaipakelvghqlalprlhqddeigmlvrsynlnqqllqrhyeeqnenamrfpvsdlpnkallmemleqvvarkqttalmiitcetlrdtagvlkeaqreillltlveklksvlsprmilaqisgydfaviangvqepwhaitlgqqvltimserlpieriqlrphcsigvamfygdltaeqlysraisaaftarhkgknqiqffdpqqmeaaqkrlteesdilnalenhqfaiwlqpqvemtsgklvsaevllriqqpdgswdlpdglidrieccglmvtvghwvleescrllaawqergimlplsvnlsalqlmhpnmvadmlelltryriqpgtlilevtesrriddphaavailrplrnagvrvalddfgmgyaglrqlqhmkslpidvlkidkmfveglpgdssmiaaiimlaqslnlqmiaegveteaqrdwlakagvgiaqgflfarplpieifeesyleek]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yhjK+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=yhjK]]&nbsp;&nbsp;


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Latest revision as of 21:41, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

yhjK

Gene Synonym(s)

ECK3514, b3529, JW5943[1], JW5943

Product Desc.

predicted zinc-dependent peptidase[2][3]

Putative c-di-GMP dual activity enzyme, function unknown; expressed protein[4]

Product Synonyms(s)

predicted diguanylate cyclase[1], B3529[2][1], YhjK[2][1] , ECK3514, JW5943, b3529

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yhjK[2]

Regulation/Activity
Quick Links



        

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Notes

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YhjK has a central GGDEF putative diguanylate cyclase, then a C-terminal putative cyclic-di-GMP phosphodiesterase EAL domain. AFMB Structural Genomics target No. 78 (http://afmb.cnrs-mrs.fr/article171.html).[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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