dmlR:Quickview: Difference between revisions

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{{Tab On|Quickview|yeaT}}{{Tab|Gene|yeaT}}{{Tab|Gene Product(s)|yeaT}}{{Tab|Expression|yeaT}}{{Tab|Evolution|yeaT}}{{Tab|On One Page|yeaT}}{{TabsBottom}}
{{Tab On|Quickview|dmlR}}{{Tab|Gene|dmlR}}{{Tab|Gene Product(s)|dmlR}}{{Tab|Expression|dmlR}}{{Tab|Evolution|dmlR}}{{Tab|On One Page|dmlR}}{{TabsBottom}}
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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''yeaT''
''dmlR''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK1797, b1799, JW1788''<ref name='LIB:Riley_2006'/>
''ECK1797, b1799, JW1788''<ref name='LIB:Riley_2006'/>, yeaT, JW1788''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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predicted DNA-binding transcriptional regulator<ref name='LIB:Riley_2006'/>, B1799<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YeaT<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''predicted DNA-binding transcriptional regulator<ref name='LIB:Riley_2006'/>, B1799<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YeaT<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> DmlR<ref name='PMID:20233924'/>, DmlR, ECK1797, JW1788, yeaT, b1799''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=yeaT&loc=MG1655:1879833..1878910,W3110:1883523..1882600,DH10B:1970404..1969481,REL606:1860387..1859464 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1860387&end=1859464&gene=yeaT&aa=mkhktrimnnlpllndlrvfmlvarragfaavaeelgvspafvskrialleqtlnvvllhrttrrvtiteegeriyewaqrilqdvgqmmdelsdvrqvpqgmlriissfgfgrqvvapallalakaypqlelrfdvedrlvdlvnegvdldirigddiapnliarklatnyrilcaspefiaqhgapkhltdlsalpclvikerdhpfgvwqlrnkegphaikvtgplssnhgeivhqwcldgqgialrswwdvseniasghlvqvlpeyyqpanvwavyvsrlatsakvritveflrqyfaehypnfsleha Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yeaT+AND+escherichia+coli Pubmed(yeaT)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/dev/search?q=yeaT Textpresso(yeaT)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=dmlR&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6985]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003572&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=dmlR&loc=MG1655%3A1879833..1878910,W3110%3A1883523..1882600,DH10B%3A1970404..1969481,REL606%3A1860387..1859464,BW2952%3A1770969..1771892]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1770969&end=1771892&gene=dmlR&aa=mkhktrimnnlpllndlrvfmlvarragfaavaeelgvspafvskrialleqtlnvvllhrttrrvtiteegeriyewaqrilqdvgqmmdelsdvrqvpqgmlriissfgfgrqvvapallalakaypqlelrfdvedrlvdlvnegvdldirigddiapnliarklatnyrilcaspefiaqhgapkhltdlsalpclvikerdhpfgvwqlrnkegphaikvtgplssnhgeivhqwcldgqgialrswwdvseniasghlvqvlpeyyqpanvwavyvsrlatsakvritveflrqyfaehypnfsleha]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=dmlR+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=dmlR]]&nbsp;&nbsp;


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Latest revision as of 21:42, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

dmlR

Gene Synonym(s)

ECK1797, b1799, JW1788[1], yeaT, JW1788

Product Desc.

predicted DNA-binding transcriptional regulator[2][3]

Positive transcriptional regulator for yeaU[4]

Product Synonyms(s)

predicted DNA-binding transcriptional regulator[1], B1799[2][1], YeaT[2][1] DmlR[5], DmlR, ECK1797, JW1788, yeaT, b1799

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yeaT[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


LysR family. YeaT does not regulate the downstream leuE gene. Mutations in yeaT or yeaU block growth on D-malate (Reed, 2006).[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ Lukas, H et al. (2010) Regulation of aerobic and anaerobic D-malate metabolism of Escherichia coli by the LysR-type regulator DmlR (YeaT). J. Bacteriol. 192 2503-11 PubMed
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