btuB:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK3958, b3966, JW3938, bfe, cer, G276''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''ECK3958, b3966, JW3938, bfe, cer, G276''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>, dcrC''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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vitamin B12/cobalamin outer membrane transporter<ref name='LIB:Riley_2006'/>, B3966<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Cer<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Bfe<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, BtuB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''vitamin B12/cobalamin outer membrane transporter<ref name='LIB:Riley_2006'/>, B3966<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Cer<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Bfe<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, BtuB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , bfe, cer, dcrC, ECK3958, JW3938, b3966''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=btuB&loc=MG1655:4161662..4163506,W3110:3473042..3471198,REL606:4143500..4145344,DH10B:4261359..4263203 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4261359&end=4263203&gene=btuB&aa=mikkaslltacsvtafsawaqdtspdtlvvtanrfeqprstvlapttvvtrqdidrwqstsvndvlrrlpgvditqnggsgqlssifirgtnashvlvlidgvrlnlagvsgsadlsqfpialvqrveyirgprsavygsdaiggvvniittrdepgteisagwgsnsyqnydvstqqqlgdktrvtllgdyahthgydvvaygntgtqaqtdndgflsktlygalehnftdawsgfvrgygydnrtnydayyspgsplldtrklysqswdaglryngeliksqlitsyshskdynydphygrydssatldemkqytvqwannvivghgsigagvdwqkqtttpgtgyvedgydqrntgiyltglqqvgdftfegaarsddnsqfgrhgtwqtsagwefiegyrfiasygtsykapnlgqlygfygnpnldpekskqwegafegltagvnwrisgyrndvsdlidyddhtlkyynegkarikgveatanfdtgplthtvsydyvdarnaitdtpllrrakqqvkyqldwqlydfdwgityqylgtrydkdyssypyqtvkmggvslwdlavaypvtshltvrgkianlfdkdyetvygyqtagreytlsgsytf Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=btuB+AND+escherichia+coli Pubmed(btuB)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/dev/search?q=btuB Textpresso(btuB)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=btuB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10126]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000122&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=btuB&loc=MG1655%3A4161662..4163506,W3110%3A3473042..3471198,REL606%3A4143500..4145344,DH10B%3A4261359..4263203,BW2952%3A4051331..4053175]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4051331&end=4053175&gene=btuB&aa=mikkaslltacsvtafsawaqdtspdtlvvtanrfeqprstvlapttvvtrqdidrwqstsvndvlrrlpgvditqnggsgqlssifirgtnashvlvlidgvrlnlagvsgsadlsqfpialvqrveyirgprsavygsdaiggvvniittrdepgteisagwgsnsyqnydvstqqqlgdktrvtllgdyahthgydvvaygntgtqaqtdndgflsktlygalehnftdawsgfvrgygydnrtnydayyspgsplldtrklysqswdaglryngeliksqlitsyshskdynydphygrydssatldemkqytvqwannvivghgsigagvdwqkqtttpgtgyvedgydqrntgiyltglqqvgdftfegaarsddnsqfgrhgtwqtsagwefiegyrfiasygtsykapnlgqlygfygnpnldpekskqwegafegltagvnwrisgyrndvsdlidyddhtlkyynegkarikgveatanfdtgplthtvsydyvdarnaitdtpllrrakqqvkyqldwqlydfdwgityqylgtrydkdyssypyqtvkmggvslwdlavaypvtshltvrgkianlfdkdyetvygyqtagreytlsgsytf]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=btuB+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=btuB]]&nbsp;&nbsp;


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Latest revision as of 21:52, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

btuB

Gene Synonym(s)

ECK3958, b3966, JW3938, bfe, cer, G276[1][2], dcrC

Product Desc.

outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23[2][3]

B12 uptake, outer membrane receptor; receptor for E colicins, phages BF23 and C1[4]

Product Synonyms(s)

vitamin B12/cobalamin outer membrane transporter[1], B3966[2][1], Cer[2][1], Bfe[2][1], BtuB[2][1] , bfe, cer, dcrC, ECK3958, JW3938, b3966

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): btuB[2]

Regulation/Activity
Quick Links



        

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


BtuB translation is regulated by adenosylcobalamin binding directly to btuB mRNA, a B12-responsive riboswitch.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.