rpsU:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''rpsU''  
''rpsU''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK3055, b3065, JW3037''<ref name='LIB:Riley_2006'/>
''ECK3055, b3065, JW3037''<ref name='LIB:Riley_2006'/>, JW3037''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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30S ribosomal subunit protein S21<ref name='LIB:Riley_2006'/>, B3065<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RpsU<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''30S ribosomal subunit protein S21<ref name='LIB:Riley_2006'/>, B3065<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RpsU<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3055, JW3037, b3065''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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'''Biological Process'''
<GO_nr />
* GO:0006412 translation ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Molecular Function'''
* GO:0003735 structural constituent of ribosome ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Cellular Component'''
* GO:0022627 cytosolic small ribosomal subunit ([http://www.geneontology.org/GO.evidence.shtml IDA])
 
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=rpsU&loc=MG1655:3208803..3209018,W3110:3209437..3209652,DH10B:3306548..3306763,REL606:3143598..3143813 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3143598&end=3143813&gene=rpsU&aa=mpvikvrenepfdvalrrfkrscekagvlaevrrrefyekptterkrakasavkrhakklarenarrtrly Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rpsU+AND+escherichia+coli Pubmed(rpsU)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=rpsU Textpresso(rpsU)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=rpsU&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10920]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000911&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=rpsU&loc=MG1655%3A3208803..3209018,W3110%3A3209437..3209652,DH10B%3A3306548..3306763,REL606%3A3143598..3143813,BW2952%3A3095951..3096166]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3095951&end=3096166&gene=rpsU&aa=mpvikvrenepfdvalrrfkrscekagvlaevrrrefyekptterkrakasavkrhakklarenarrtrly]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rpsU+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=rpsU]]&nbsp;&nbsp;


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Latest revision as of 21:46, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

rpsU

Gene Synonym(s)

ECK3055, b3065, JW3037[1], JW3037

Product Desc.

30S ribosomal subunit protein S21[2][3];

Component of 30S ribosomal subunit[2][3]; ribosome[2][3]

30S ribosomal subunit protein S21[4]

Product Synonyms(s)

30S ribosomal subunit protein S21[1], B3065[2][1], RpsU[2][1] , ECK3055, JW3037, b3065

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): rpsU[2], rpsU-dnaG-rpoD[2]

Regulation/Activity
Quick Links



        

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Notes

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rpsU has been shown to be an essential gene (Bubunenko, 2007).[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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