yieL:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''yieL''  
''yieL''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK3712, b3719, JW5612''<ref name='LIB:Riley_2006'/>
''ECK3712, b3719, JW5612''<ref name='LIB:Riley_2006'/>, JW5612''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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predicted xylanase<ref name='LIB:Riley_2006'/>, B3719<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YieL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''predicted xylanase<ref name='LIB:Riley_2006'/>, B3719<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YieL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3712, JW5612, b3719''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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'''Biological Process'''
<GO_nr />
* GO:0016052 carbohydrate catabolic process ([http://www.geneontology.org/GO.evidence.shtml ISS])
 
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=yieL&loc=MG1655:3898627..3897431,W3110:3736077..3737273,DH10B:3996211..3995015,REL606:3860973..3859777 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3860973&end=3859777&gene=yieL&aa=mvmelnernitmnikiaaltlaiasgisaqwaiaadmpaspaptipvkqyvtqvnadnsvtfryfapgaknvsvvvgvpvpdnihpmtkdeagvwswrtpilkgnlyeyffnvdgvrsidtgtamtnpqrqvnssmilvpgsyldtrsvahgdliaityhsnalqserqmyvwtppgytgmgeplpvlyfyhgfgdtgrsaidqgripqimdnllaegkikpmlvvipdtetdakgiipedfvpqerrkvfyplnakaadrelmndiipliskrfnvrkdadgralaglsqggyqalvsgmnhlesfgwlatfsgvttttvpdegvaarlndpaainqqlrnftvvvgdkdvvtgkdiaglkteleqkkinfdyqeypglnhemdvwrpayaafvqklfk Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yieL+AND+escherichia+coli Pubmed(yieL)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=yieL Textpresso(yieL)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=yieL&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11729]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001668&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=yieL&loc=MG1655%3A3898627..3897431,W3110%3A3736077..3737273,DH10B%3A3996211..3995015,REL606%3A3860973..3859777,BW2952%3A3785764..3786933]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3785764&end=3786933&gene=yieL&aa=mvmelnernitmnikiaaltlaiasgisaqwaiaadmpaspaptipvkqyvtqvnadnsvtfryfapgaknvsvvvgvpvpdnihpmtkdeagvwswrtpilkgnlyeyffnvdgvrsidtgtamtnpqrqvnssmilvpgsyldtrsvahgdliaityhsnalqserqmyvwtppgytgmgeplpvlyfyhgfgdtgrsaidqgripqimdnllaegkikpmlvvipdtetdakgiipedfvpqerrkvfyplnakaadrelmndiipliskrfnvrkdadgralaglsqggyqalvsgmnhlesfgwlatfsgvttttvpdegvaarlndpaainqqlrnftvvvgdkdvvtgkdiaglkteleqkkinfdyqeypglnhemdvwrpayaafvqklfk]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yieL+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=yieL]]&nbsp;&nbsp;


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Latest revision as of 21:40, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

yieL

Gene Synonym(s)

ECK3712, b3719, JW5612[1], JW5612

Product Desc.

putative xylanase[2][3]

Function unknown, bgl operon; endo-1,4-beta-xylanase homolog[4]

Product Synonyms(s)

predicted xylanase[1], B3719[2][1], YieL[2][1] , ECK3712, JW5612, b3719

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yieK[2]

Regulation/Activity
Quick Links



        

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Notes

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yieL is co-expressed with the upstream bglGFBH operon. Related to peptidase S9 family; not in MEROPS, but it has homologs.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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