trpR:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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{| id="Y49b0274947592"  class=" tableEdit New_Quickview_Table"   
{|   id="Y49b0274947592"  class=" tableEdit New_Quickview_Table"   


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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''trpR''  
''trpR''
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK4385, b4393, JW4356, rtrY''<ref name='LIB:Riley_2006'/>
''ECK4385, b4393, JW4356, rtrY''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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TrpR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
TrpR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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Autogenously regulated tryptophan repressor protein; regulator of trp operon, aroH, and other members of the TrpR regulon; 5-Methyltryptophan resistance<ref name='LIB:EcoGene'/>
Autogenously regulated tryptophan repressor protein; regulator of trp operon, aroH, and other members of the TrpR regulon; 5-Methyltryptophan resistance<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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DNA-binding transcriptional repressor, tryptophan-binding product<ref name='LIB:Riley_2006'/>, B4393 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RtrY product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TrpR product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, regulator for trp operon and aroH; trp aporepressor product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''DNA-binding transcriptional repressor, tryptophan-binding <ref name='LIB:Riley_2006'/>, B4393 <ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RtrY <ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TrpR <ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, regulator for trp operon and aroH; trp aporepressor <ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK4385, JW4356, b4393''
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:trpR|trpR]]<ref name='LIB:EcoCyc10.6'/>, OP00310  
transcription unit(s): [[:Category:Txn_unit:trpR|trpR]]<ref name='LIB:EcoCyc10.6'/>, OP00310  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=trpR&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11029]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001018&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=trpR&loc=MG1655%3A4630783..4631109,W3110%3A4637440..4637766,REL606%3A4620973..4621299,DH10B%3A4677245..4677571,BW2952%3A4569267..4569593]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4569267&end=4569593&gene=trpR&aa=maqqspysaamaeqrhqewlrfvdllknayqndlhlpllnlmltpderealgtrvriveellrgemsqrelknelgagiatitrgsnslkaapvelrqwleevllksd]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=trpR+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=trpR]]&nbsp;&nbsp;


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Latest revision as of 21:45, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

trpR

Gene Synonym(s)

ECK4385, b4393, JW4356, rtrY[1]

Product Desc.

TrpR[2][3];

Component of TrpR transcriptional repressor[2][3]; TrpR-Tryptophan transcriptional repressor[2][3]

Autogenously regulated tryptophan repressor protein; regulator of trp operon, aroH, and other members of the TrpR regulon; 5-Methyltryptophan resistance[4]

Product Synonyms(s)

DNA-binding transcriptional repressor, tryptophan-binding [1], B4393 [2][1], RtrY [2][1], TrpR [2][1], regulator for trp operon and aroH; trp aporepressor [2][1] , ECK4385, JW4356, b4393

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): trpR[2], OP00310

Regulation/Activity
Quick Links



        

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Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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