recD:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''recD''  
''recD''
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK2815, b2819, JW2787, hopE''<ref name='LIB:Riley_2006'/>
''ECK2815, b2819, JW2787, hopE''<ref name='LIB:Riley_2006'/>, hopE''
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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RecBCD Exonuclease V subunit, recombination and repair; recD mutants are constitutively activated for recombination; RecBCD 5'-3' fast helicase subunit; RecD alone has 5'-3' helicase activity; contains ATP-binding site; binds RecC; inhibits RecA loading<ref name='LIB:EcoGene'/>
RecBCD Exonuclease V subunit, recombination and repair; recD mutants are constitutively activated for recombination; RecBCD 5'-3' fast helicase subunit; RecD alone has 5'-3' helicase activity; contains ATP-binding site; binds RecC; inhibits RecA loading<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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exonuclease V (RecBCD complex), alpha chain<ref name='LIB:Riley_2006'/>, B2819<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HopE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RecD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''exonuclease V (RecBCD complex), alpha chain<ref name='LIB:Riley_2006'/>, B2819<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HopE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RecD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2815, hopE, JW2787, b2819''
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:recD|recD]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:recD|recD]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=recD&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10826]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000817&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=recD&loc=MG1655%3A2950483..2948657,W3110%3A2951117..2949291,REL606%3A2847080..2845254,DH10B%3A3044353..3042527,BW2952%3A2835805..2837631]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2835805&end=2837631&gene=recD&aa=mklqkqlleavehkqlrpldvqfaltvagdehpavtlaaallshdageghvclplsrlenneashpllatcvseigelqnweecllasqavsrgdeptpmilcgdrlylnrmwcnertvarffnevnhaievdeallaqtldklfpvsdeinwqkvaaavaltrrisvisggpgtgktttvakllaaliqmadgercrirlaaptgkaaarlteslgkalrqlpltdeqkkripedastlhrllgaqpgsqrlrhhagnplhldvlvvdeasmidlpmmsrlidalpdharviflgdrdqlasveagavlgdicayanagftaerarqlsrltgthvpagtgteaaslrdslcllqksyrfgsdsgigqlaaainrgdktavktvfqqdftdiekrllqsgedyiamleealagygryldllqaraepdliiqafneyqllcalregpfgvaglnerieqfmqqkrkihrhphsrwyegrpvmiarndsalglfngdigialdrgqgtrvwfampdgniksvqpsrlpehettwamtvhksqgsefdhaalilpsqrtpvvtrelvytavtrarrrlslyaderilsaaiatrterrsglaalfssre]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=recD+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=recD]]&nbsp;&nbsp;


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Latest revision as of 21:56, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

recD

Gene Synonym(s)

ECK2815, b2819, JW2787, hopE[1], hopE

Product Desc.

DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease[2][3];

Component of recBCD[2][3]

RecBCD Exonuclease V subunit, recombination and repair; recD mutants are constitutively activated for recombination; RecBCD 5'-3' fast helicase subunit; RecD alone has 5'-3' helicase activity; contains ATP-binding site; binds RecC; inhibits RecA loading[4]

Product Synonyms(s)

exonuclease V (RecBCD complex), alpha chain[1], B2819[2][1], HopE[2][1], RecD[2][1] , ECK2815, hopE, JW2787, b2819

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): recD[2]

Regulation/Activity
Quick Links



        

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Notes

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RecBCD is a bipolar helicase.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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