pspC:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''pspC''  
''pspC''
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK1301, b1306, JW1299''<ref name='LIB:Riley_2006'/>
''ECK1301, b1306, JW1299''<ref name='LIB:Riley_2006'/>, JW1299''
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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PspC transcriptional regulator; toxin of a PspC-PspB toxin-antitoxin pair<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
PspC transcriptional regulator; toxin of a PspC-PspB toxin-antitoxin pair<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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Positive regulatory gene, cooperatively with PspB; facilitates binding of PspA to PspB; membrane protein; dimer<ref name='LIB:EcoGene'/>
Positive regulatory gene, cooperatively with PspB; facilitates binding of PspA to PspB; membrane protein; dimer<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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DNA-binding transcriptional activator<ref name='LIB:Riley_2006'/>, B1306<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PspC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, phage shock protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''DNA-binding transcriptional activator<ref name='LIB:Riley_2006'/>, B1306<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PspC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, phage shock protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1301, JW1299, b1306''
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:pspABCDE|pspABCDE]]<ref name='LIB:EcoCyc10.6'/>, pspABCE  
transcription unit(s): [[:Category:Txn_unit:pspABCDE|pspABCDE]]<ref name='LIB:EcoCyc10.6'/>, pspABCE  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
||
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=pspC&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10778]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000769&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=pspC&loc=MG1655%3A1367049..1367408,W3110%3A1370739..1371098,DH10B%3A1456445..1456804,REL606%3A1367393..1367752,BW2952%3A1257898..1258257]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1257898&end=1258257&gene=pspC&aa=maginlnkklwripqqgmvrgvcagianyfdvpvklvrilvvlsiffglalftlvayiilsfaldpmpdnmafgeqlpssselldevdrelaasetrlremeryvtsdtftlrsrfrql]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=pspC+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=pspC]]&nbsp;&nbsp;


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Latest revision as of 21:54, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

pspC

Gene Synonym(s)

ECK1301, b1306, JW1299[1], JW1299

Product Desc.

PspC transcriptional regulator; toxin of a PspC-PspB toxin-antitoxin pair[2][3];

Component of PspC transcriptional regulator; toxin of a PspC-PspB toxin-antitoxin pair[3]

Positive regulatory gene, cooperatively with PspB; facilitates binding of PspA to PspB; membrane protein; dimer[4]

Product Synonyms(s)

DNA-binding transcriptional activator[1], B1306[2][1], PspC[2][1], phage shock protein[2][1] , ECK1301, JW1299, b1306

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): pspABCDE[2], pspABCE

Regulation/Activity
Quick Links



        

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Notes

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Overexpression causes abnormal biofilm architecture. Overexpression also reported to inhibit growth (Brown, 2003).[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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