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{{Tab On|Quickview|basS}}{{Tab|Gene|basS}}{{Tab|Gene Product(s)|basS}}{{Tab|Expression|basS}}{{Tab|Evolution|basS}}{{Tab|On One Page|basS}}{{TabsBottom}}
{{Tab On|Quickview|basS}}{{Tab|Gene|basS}}{{Tab|Gene Product(s)|basS}}{{Tab|Expression|basS}}{{Tab|Evolution|basS}}{{Tab|On One Page|basS}}{{TabsBottom}}
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{|   id="I49aee0f70ba7e"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[basS:Gene|''basS]]'' (synonyms: ''ECK4105, b4112, JW4073, pmrB'')<ref name='LIB:Riley_2006'/>
''basS''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[basS:Gene_Product(s)|BasS product, BasS product]]<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>: B4112 product, PmrB product, sensor protein BasS product, sensor kinase-phosphotransferase BasS product, unphosphorylated sensor kinase-phosphotransferase BasS product, unmodified sensor kinase-phosphotransferase BasS product
''ECK4105, b4112, JW4073, pmrB''<ref name='LIB:Riley_2006'/>, pmrB''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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BasS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
sensory histidine kinase in two-component regulatory system with BasR<ref name='LIB:Riley_2006'/>


Histidine protein kinase sensor Lipid A modification genes; two-component system involved in polymyxin resistance that senses high extracellular Fe(2+)<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''B4112<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PmrB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ECK4105, JW4073, pmrB, b4112''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:basRS|basRS]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:basRS|basRS]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=basS&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11614]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001562&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=basS&loc=MG1655%3A4331295..4330204,W3110%3A4337950..4336859,REL606%3A4311986..4310895,DH10B%3A4431657..4430566,BW2952%3A4268939..4270030]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4268939&end=4270030&gene=basS&aa=mhflrrpislrqrliltigaillvfelisvfwlwhesteqiqlfeqalrdnrnndrhimreireavaslivpgvfmvsltlficyqavrritrplaelqkeleartadnltpiaihsatleieavvsalndlvsrltstldnerlftadvahelrtplagvrlhlellakthhidvaplvarldqmmesvsqllqlaragqsfssgnyqhvklledvilpsydelstmldqrqqtlllpesaaditvqgdatllrmllrnlvenahryspqgsnimiklqeddgavmavedegpgideskcgelskafvrmdsryggiglglsivsritqlhhgqfflqnrqetsgtrawvrlkkdqyvanqi]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=basS+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=basS]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
BasR is the cognate response regulator of the BasSR two-component system. The BasSR regulon has been primarily characterized in Salmonella; unlike E. coli, Salmonella also activates PmrAB(BasSR) in low Mg(2+), mediated by PhoPQ and the PmrD protein.<ref name='LIB:EcoGene'/>
 




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==References==
==References==
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Latest revision as of 21:52, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

basS

Gene Synonym(s)

ECK4105, b4112, JW4073, pmrB[1], pmrB

Product Desc.

sensory histidine kinase in two-component regulatory system with BasR[1]

Histidine protein kinase sensor Lipid A modification genes; two-component system involved in polymyxin resistance that senses high extracellular Fe(2+)[2]

Product Synonyms(s)

B4112[3][1], PmrB[3][1], ECK4105, JW4073, pmrB, b4112

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): basRS[3]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


BasR is the cognate response regulator of the BasSR two-component system. The BasSR regulon has been primarily characterized in Salmonella; unlike E. coli, Salmonella also activates PmrAB(BasSR) in low Mg(2+), mediated by PhoPQ and the PmrD protein.[2]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
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