Phage lambda p22:Gene: Difference between revisions
Adding section & Genetic interactions table to Gene pages. |
touch |
||
| (2 intermediate revisions by 2 users not shown) | |||
| Line 38: | Line 38: | ||
!align=left {{table_heading_style}} |Standard name | !align=left {{table_heading_style}} |Standard name | ||
|| | || | ||
''Phage lambda p22'' | ''Phage lambda p22'' | ||
|- | |- | ||
!align=left {{table_heading_style}} |Mnemonic | !align=left {{table_heading_style}} |Mnemonic | ||
| Line 49: | Line 49: | ||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..M46b16acc0599b&page=&pagename={{FULLPAGENAMEE}}&type=1&template=Gene_nomenclature_table edit table]</span> || | |<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..M46b16acc0599b&page=103825&pagename={{FULLPAGENAMEE}}&type=1&template=Gene_nomenclature_table edit table]</span> || | ||
|} | |} | ||
<!--box uid=421aa90e079fa326b6494f812ad13e79..M46b16acc0599b--> | <!--box uid=421aa90e079fa326b6494f812ad13e79..M46b16acc0599b--> | ||
| Line 67: | Line 67: | ||
* | * | ||
****************************************************************************************** -->{{Gene_location_help}} | ****************************************************************************************** -->{{Gene_location_help}} | ||
{| | {| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" class=" tableEdit Gene_location_table" | ||
|- {{table_heading_style}} | |- {{table_heading_style}} | ||
!|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links | !|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links | ||
| Line 74: | Line 74: | ||
NC_001416 | NC_001416 | ||
| | | | ||
| | | | ||
NC_001416: 35582..18482<br />{{GBrowseFigureByCoord|18482|35582|bacteriophage_lambda|NC_001416}} | NC_001416: 35582..18482<br />{{GBrowseFigureByCoord|18482|35582|bacteriophage_lambda|NC_001416}} | ||
| Line 83: | Line 83: | ||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..H46b16acd2399f&page=&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_location_table edit table]</span> || || || || | |<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..H46b16acd2399f&page=103825&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_location_table edit table]</span> || || || || | ||
|} | |} | ||
<!--box uid=421aa90e079fa326b6494f812ad13e79..H46b16acd2399f--> | <!--box uid=421aa90e079fa326b6494f812ad13e79..H46b16acd2399f--> | ||
| Line 100: | Line 100: | ||
* | * | ||
****************************************************************************************** -->{{Gene_sequence_features_help}} | ****************************************************************************************** -->{{Gene_sequence_features_help}} | ||
{| | {| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" class=" tableEdit Gene_sequence_features_table" | ||
|- {{table_heading_style}} | |- {{table_heading_style}} | ||
!|Feature Type!!Strain!!Genomic Location!!Evidence!!Reference!!Notes | !|Feature Type!!Strain!!Genomic Location!!Evidence!!Reference!!Notes | ||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..G46a3d78e04c3b&page=&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_sequence_features_table edit table]</span> || || || || || | |<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..G46a3d78e04c3b&page=103825&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_sequence_features_table edit table]</span> || || || || || | ||
|} | |} | ||
<!--box uid=421aa90e079fa326b6494f812ad13e79..G46a3d78e04c3b--> | <!--box uid=421aa90e079fa326b6494f812ad13e79..G46a3d78e04c3b--> | ||
| Line 122: | Line 122: | ||
* | * | ||
****************************************************************************************** -->{{Gene_alleles_help}} | ****************************************************************************************** -->{{Gene_alleles_help}} | ||
{| | {| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" class=" tableEdit Gene_allele_table dataTable" | ||
|- {{table_heading_style}} | |- {{table_heading_style}} | ||
!|Allele!!Nt change(s)!!AA change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments | !|Allele!!Nt change(s)!!AA change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments | ||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..D46b16aceeb503&page=&pagename={{FULLPAGENAMEE}}&type=&template=Gene_allele_table edit table]</span> || || || || || || || | |<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..D46b16aceeb503&page=103825&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_allele_table edit table]</span> || || || || || || || | ||
|} | |} | ||
<!--box uid=421aa90e079fa326b6494f812ad13e79..D46b16aceeb503--> | <!--box uid=421aa90e079fa326b6494f812ad13e79..D46b16aceeb503--> | ||
| Line 145: | Line 145: | ||
* | * | ||
****************************************************************************************** -->{{Genetic_interaction_help}} | ****************************************************************************************** -->{{Genetic_interaction_help}} | ||
{| | {| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="Q4e04b61a24af7" class=" tableEdit Genetic_interaction_table dataTable" | ||
|- {{table_heading_style}} | |- {{table_heading_style}} | ||
!|Interactor!!Interaction!!Allele!!Score(s)!!Reference(s)!!Accessions!!Notes | !|Interactor!!Interaction!!Allele!!Score(s)!!Reference(s)!!Accessions!!Notes | ||
| Line 166: | Line 166: | ||
* | * | ||
****************************************************************************************** -->{{Gene_resources_help}} | ****************************************************************************************** -->{{Gene_resources_help}} | ||
{| | {| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" class=" tableEdit Gene_resource_table" | ||
|- {{table_heading_style}} | |- {{table_heading_style}} | ||
!|Resource!!Resource Type!!Source!!Notes/Reference | !|Resource!!Resource Type!!Source!!Notes/Reference | ||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..T46a3d78e649c5&page=&pagename={{FULLPAGENAMEE}}&type=&template=Gene_resource_table edit table]</span> || || || | |<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..T46a3d78e649c5&page=103825&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_resource_table edit table]</span> || || || | ||
|} | |} | ||
<!--box uid=421aa90e079fa326b6494f812ad13e79..T46a3d78e649c5--> | <!--box uid=421aa90e079fa326b6494f812ad13e79..T46a3d78e649c5--> | ||
| Line 188: | Line 188: | ||
* | * | ||
****************************************************************************************** -->{{Gene_accessions_help}} | ****************************************************************************************** -->{{Gene_accessions_help}} | ||
{| | {| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" class=" tableEdit Gene_accessions_table" | ||
|- {{table_heading_style}} | |- {{table_heading_style}} | ||
!|Database!!Accession!!Notes | !|Database!!Accession!!Notes | ||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..E46b16ad094aab&page=&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_accessions_table edit table]</span> || || | |<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..E46b16ad094aab&page=103825&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_accessions_table edit table]</span> || || | ||
|} | |} | ||
<!--box uid=421aa90e079fa326b6494f812ad13e79..E46b16ad094aab--> | <!--box uid=421aa90e079fa326b6494f812ad13e79..E46b16ad094aab--> | ||
| Line 210: | Line 210: | ||
* | * | ||
****************************************************************************************** --> | ****************************************************************************************** --> | ||
{| | {| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" class=" tableEdit Links_table" | ||
|- {{table_heading_style}} | |- {{table_heading_style}} | ||
!|Name!!URL!!Comments | !|Name!!URL!!Comments | ||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..V46b16ad15e22f&page=&pagename={{FULLPAGENAMEE}}&type=0&template=Links_table edit table]</span> || || | |<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..V46b16ad15e22f&page=103825&pagename={{FULLPAGENAMEE}}&type=0&template=Links_table edit table]</span> || || | ||
|} | |} | ||
<!--box uid=421aa90e079fa326b6494f812ad13e79..V46b16ad15e22f--> | <!--box uid=421aa90e079fa326b6494f812ad13e79..V46b16ad15e22f--> | ||
| Line 227: | Line 227: | ||
__NOTOC__ | __NOTOC__ | ||
===Categories=== | ===Categories=== | ||
Latest revision as of 20:36, 19 September 2013
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Location(s) and DNA Sequence | Sequence Features | Alleles and Phenotypes | Genetic Interactions | Genetic Resources | Accessions | Links | References | Suggestions |
Nomenclature
See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.
| Standard name |
Phage lambda p22 |
|---|---|
| Mnemonic | |
| Synonyms |
lambdap22 |
| edit table |
See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.
Notes
Location(s) and DNA Sequence
See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.
| Strain | Map location | Genome coordinates | Genome browsers | Sequence links |
|---|---|---|---|---|
|
NC_001416 |
NC_001416: 35582..18482 |
|||
| edit table |
See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.
Notes
Sequence Features
See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.
| Feature Type | Strain | Genomic Location | Evidence | Reference | Notes |
|---|---|---|---|---|---|
| edit table |
See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.
Notes
Alleles and Phenotypes
See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.
| Allele | Nt change(s) | AA change(s) | Phenotype: Type | Phenotype: Description | Reference | Availability | Comments |
|---|---|---|---|---|---|---|---|
| edit table |
See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.
Notes
Genetic Interactions
| Interactor | Interaction | Allele | Score(s) | Reference(s) | Accessions | Notes |
|---|---|---|---|---|---|---|
| edit table |
Notes
Genetic Resources
See Help:Gene_resources for help entering information into the Genetic Resources table.
| Resource | Resource Type | Source | Notes/Reference |
|---|---|---|---|
| edit table |
See Help:Gene_resources for help entering information into the Genetic Resources table.
Notes
Accessions in Other Databases
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
| Database | Accession | Notes |
|---|---|---|
| edit table |
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
Notes
Links
| Name | URL | Comments |
|---|---|---|
| edit table |
See Help:Links_table for how to enter or edit information in this section of EcoliWiki.
<protect>
References
See Help:References for how to manage references in EcoliWiki.