rhlB:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[rhlB:Gene|''rhlB]]'' (synonyms: ''ECK3772, b3780, JW3753, mmrA, G704'')<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''rhlB''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[rhlB:Gene_Product(s)|RhlB product]]<ref name='LIB:Riley_2006'/>: ATP-dependent RNA helicase product, B3780 product, MmrA product
''ECK3772, b3780, JW3753, mmrA, G704''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>, mmrA?''
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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EG10844-MONOMER<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
EG10844<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:RhlB, ATP-dependent RNA helicase of the RNA degradosome|RhlB, ATP-dependent RNA helicase of the RNA degradosome]]<ref name='LIB:EcoCyc11.1'/>,[[:Category:Complex:degradosome|degradosome]]<ref name='LIB:EcoCyc11.1'/>
Component of [[:Category:Complex:RhlB, ATP-dependent RNA helicase of the RNA degradosome|RhlB, ATP-dependent RNA helicase of the RNA degradosome]]<ref name='LIB:EcoCyc11.1'/>; [[:Category:Complex:degradosome|degradosome]]<ref name='LIB:EcoCyc11.1'/>


ATP-dependent RNA helicase; unwinds dsRNA; component of RNA degradosome; also binds PNPase directly; DEAD box family<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''ATP-dependent RNA helicase<ref name='LIB:Riley_2006'/>, B3780<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MmrA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RhlB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3772, JW3753, mmrA?, b3780''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:rhlB|rhlB]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:rhlB|rhlB]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=rhlB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10844]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000835&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=rhlB&loc=MG1655%3A3963653..3962388,W3110%3A3671051..3672316,REL606%3A3927430..3926165,DH10B%3A4062573..4061308,BW2952%3A3852057..3853322]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3852057&end=3853322&gene=rhlB&aa=mskthlteqkfsdfalhpkvvealekkgfhnctpiqalalpltlagrdvagqaqtgtgktmafltstfhyllshpaiadrkvnqpralimaptrelavqihadaeplaeatglklglayggdgydkqlkvlesgvdiligttgrlidyakqnhinlgaiqvvvldeadrmydlgfikdirwlfrrmppanqrlnmlfsatlsyrvrelafeqmnnaeyievepeqktghrikeelfypsneekmrllqtlieeewpdraiifantkhrceeiwghlaadghrvglltgdvaqkkrlrildeftrgdldilvatdvaarglhipavthvfnydlpddcedyvhrigrtgragasghsislaceeyalnlpaietyighsipvskynpdalmtdlpkplrltrprtgngprrtgaprnrrrsg]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rhlB+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=rhlB]]&nbsp;&nbsp;


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Latest revision as of 21:55, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

rhlB

Gene Synonym(s)

ECK3772, b3780, JW3753, mmrA, G704[1][2], mmrA?

Product Desc.

EG10844[2][3];

Component of RhlB, ATP-dependent RNA helicase of the RNA degradosome[3]; degradosome[3]

ATP-dependent RNA helicase; unwinds dsRNA; component of RNA degradosome; also binds PNPase directly; DEAD box family[4]

Product Synonyms(s)

ATP-dependent RNA helicase[1], B3780[2][1], MmrA[2][1], RhlB[2][1] , ECK3772, JW3753, mmrA?, b3780

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): rhlB[2]

Regulation/Activity
Quick Links



        

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Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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