prc:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK1829, b1830, JW1819, tsp''<ref name='LIB:Riley_2006'/>
''ECK1829, b1830, JW1819, tsp''<ref name='LIB:Riley_2006'/>, tsp''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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carboxy-terminal protease for penicillin-binding protein 3<ref name='LIB:Riley_2006'/>, B1830<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Tsp<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Prc<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, c-terminal processing peptidase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, protease re<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''carboxy-terminal protease for penicillin-binding protein 3<ref name='LIB:Riley_2006'/>, B1830<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Tsp<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Prc<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, c-terminal processing peptidase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, protease re<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1829, JW1819, tsp, b1830''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=prc&loc=MG1655:1912840..1910792,W3110:1916530..1914482,DH10B:2003411..2001363,REL606:1893393..1891345 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1893393&end=1891345&gene=prc&aa=mnmffrltalagllaiagqtfaveditradqipvlkeetqhatvservtsrftrshyrqfdldqafsakifdrylnlldyshnvllasdveqfakkktelgdelrsgkldvfydlynlaqkrrferyqyalsvlekpmdftgndtynldrskapwpkneaelnalwdskvkfdelslkltgktdkeiretltrrykfairrlaqtnsedvfslamtafareidphtnylsprnteqfntemslslegigavlqmdddytvinsmvaggpaakskaisvgdkivgvgqtgkpmvdvigwrlddvvalikgpkgskvrleilpagkgtktrtvtltrerirledravkmsvktvgkekvgvldipgfyvgltddvkvqlqklekqnvssviidlrsngggalteavslsglfipagpivqvrdnngkvredsdtdgqvfykgplvvlvdrfsasaseifaaamqdygralvvgeptfgkgtvqqyrslnriydqmlrpewpalgsvqytiqkfyrvnggstqrkgvtpdiimptgneetetgekfednalpwdsidaatyvksgdltafepellkehnariakdpefqnimkdiarfnamkdkrnivslnyavrekenneddatrlarlnerfkregkpelkklddlpkdyqepdpyldetvnialdlaklekarpaeqpapvk Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=prc+AND+escherichia+coli Pubmed(prc)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/dev/search?q=prc Textpresso(prc)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=prc&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10760]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000751&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=prc&loc=MG1655%3A1912840..1910792,W3110%3A1916530..1914482,DH10B%3A2003411..2001363,REL606%3A1893393..1891345,BW2952%3A1802851..1804899]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1802851&end=1804899&gene=prc&aa=mnmffrltalagllaiagqtfaveditradqipvlkeetqhatvservtsrftrshyrqfdldqafsakifdrylnlldyshnvllasdveqfakkktelgdelrsgkldvfydlynlaqkrrferyqyalsvlekpmdftgndtynldrskapwpkneaelnalwdskvkfdelslkltgktdkeiretltrrykfairrlaqtnsedvfslamtafareidphtnylsprnteqfntemslslegigavlqmdddytvinsmvaggpaakskaisvgdkivgvgqtgkpmvdvigwrlddvvalikgpkgskvrleilpagkgtktrtvtltrerirledravkmsvktvgkekvgvldipgfyvgltddvkvqlqklekqnvssviidlrsngggalteavslsglfipagpivqvrdnngkvredsdtdgqvfykgplvvlvdrfsasaseifaaamqdygralvvgeptfgkgtvqqyrslnriydqmlrpewpalgsvqytiqkfyrvnggstqrkgvtpdiimptgneetetgekfednalpwdsidaatyvksgdltafepellkehnariakdpefqnimkdiarfnamkdkrnivslnyavrekenneddatrlarlnerfkregkpelkklddlpkdyqepdpyldetvnialdlaklekarpaeqpapvk]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=prc+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=prc]]&nbsp;&nbsp;


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Latest revision as of 21:54, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

prc

Gene Synonym(s)

ECK1829, b1830, JW1819, tsp[1], tsp

Product Desc.

tail-specific protease[2][3]

Periplasmic carboxy-terminal protease with specificity for non-polar C-termini[4]

Product Synonyms(s)

carboxy-terminal protease for penicillin-binding protein 3[1], B1830[2][1], Tsp[2][1], Prc[2][1], c-terminal processing peptidase[2][1], protease re[2][1] , ECK1829, JW1819, tsp, b1830

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): prc[2]

Regulation/Activity
Quick Links



        

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Notes

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Penicillin-binding protein PBP3 is a typical Prc substrate. Prc contains a PDZ domain involved in substrate recognition. Binds TrxA (Kumar, 2004).[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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