acnB:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''acnB''  
''acnB''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0117, b0118, JW0114, yacI, yacJ''<ref name='LIB:Riley_2006'/>
''ECK0117, b0118, JW0114, yacI, yacJ''<ref name='LIB:Riley_2006'/>, yacJ''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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Aconitase B; 2-methylaconitate hydratase; apo-enzyme binds mRNA for negative translational autoregulation; iron-sulfur cluster; monomeric<ref name='LIB:EcoGene'/>
Aconitase B; 2-methylaconitate hydratase; apo-enzyme binds mRNA for negative translational autoregulation; iron-sulfur cluster; monomeric<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase<ref name='LIB:Riley_2006'/>, B0118<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YacI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YacJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AcnB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase<ref name='LIB:Riley_2006'/>, B0118<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YacI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YacJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AcnB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0117, JW0114, yacI, yacJ, b0118''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
<GO_nr />
* GO:0003994 aconitate hydratase activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
 
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=acnB&loc=MG1655:131615..134212,W3110:131615..134212,DH10B:105719..108316,REL606:134419..137016 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=134419&end=137016&gene=acnB&aa=mleeyrkhvaeraaegiapkpldanqmaalvellknppageeeflldlltnrvppgvdeaayvkagflaaiakgeaksplltpekaiellgtmqggynihplidalddaklapiaakalshtllmfdnfydveekakagneyakqvmqswadaewflnrpalaekltvtvfkvtgetntddlspapdawsrpdiplhalamlknaregiepdqpgvvgpikqiealqqkgfplayvgdvvgtgssrksatnsvlwfmgddiphvpnkrggglclggkiapiffntmedagalpievdvsnlnmgdvidvypykgevrnhetgellatfelktdvlidevraggripliigrglttkarealglphsdvfrqakdvaesdrgfslaqkmvgracgvkgirpgaycepkmtsvgsqdttgpmtrdelkdlaclgfsadlvmqsfchtaaypkpvdvnthhtlpdfimnrggvslrpgdgvihswlnrmllpdtvgtggdshtrfpigisfpagsglvafaaatgvmpldmpesvlvrfkgkmqpgitlrdlvhaiplyaikqglltvekkgkknifsgrileieglpdlkveqafeltdasaersaagctiklnkepiieylnsnivllkwmiaegygdrrtlerriqgmekwlanpelleadadaeyaavididladikepilcapndpddarplsavqgekidevfigscmtnighfraagklldahkgqlptrlwvapptrmdaaqlteegyysvfgksgarieipgcslcmgnqarvadgatvvststrnfpnrlgtganvflasaelaavaaligklptpeeyqtyvaqvdktavdtyrylnfnqlsqytekadgvifqtav Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=acnB+AND+escherichia+coli Pubmed(acnB)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=acnB Textpresso(acnB)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=acnB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG12316]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002193&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=acnB&loc=MG1655%3A131615..134212,W3110%3A131615..134212,DH10B%3A105719..108316,REL606%3A134419..137016,BW2952%3A131614..134211]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=131614&end=134211&gene=acnB&aa=mleeyrkhvaeraaegiapkpldanqmaalvellknppageeeflldlltnrvppgvdeaayvkagflaaiakgeaksplltpekaiellgtmqggynihplidalddaklapiaakalshtllmfdnfydveekakagneyakqvmqswadaewflnrpalaekltvtvfkvtgetntddlspapdawsrpdiplhalamlknaregiepdqpgvvgpikqiealqqkgfplayvgdvvgtgssrksatnsvlwfmgddiphvpnkrggglclggkiapiffntmedagalpievdvsnlnmgdvidvypykgevrnhetgellatfelktdvlidevraggripliigrglttkarealglphsdvfrqakdvaesdrgfslaqkmvgracgvkgirpgaycepkmtsvgsqdttgpmtrdelkdlaclgfsadlvmqsfchtaaypkpvdvnthhtlpdfimnrggvslrpgdgvihswlnrmllpdtvgtggdshtrfpigisfpagsglvafaaatgvmpldmpesvlvrfkgkmqpgitlrdlvhaiplyaikqglltvekkgkknifsgrileieglpdlkveqafeltdasaersaagctiklnkepiieylnsnivllkwmiaegygdrrtlerriqgmekwlanpelleadadaeyaavididladikepilcapndpddarplsavqgekidevfigscmtnighfraagklldahkgqlptrlwvapptrmdaaqlteegyysvfgksgarieipgcslcmgnqarvadgatvvststrnfpnrlgtganvflasaelaavaaligklptpeeyqtyvaqvdktavdtyrylnfnqlsqytekadgvifqtav]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=acnB+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=acnB]]&nbsp;&nbsp;


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Latest revision as of 21:53, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

acnB

Gene Synonym(s)

ECK0117, b0118, JW0114, yacI, yacJ[1], yacJ

Product Desc.

Aconitase B; 2-methylaconitate hydratase; apo-enzyme binds mRNA for negative translational autoregulation; iron-sulfur cluster; monomeric[2]

Product Synonyms(s)

bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase[1], B0118[3][1], YacI[3][1], YacJ[3][1], AcnB[3][1] , ECK0117, JW0114, yacI, yacJ, b0118

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): acnB[3]

Regulation/Activity
Quick Links



        

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Notes

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Binds TrxA (Kumar, 2004).[2]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  3. ↑ 3.0 3.1 3.2 3.3 3.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
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