ada:Quickview: Difference between revisions

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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[ada:Gene|''ada]]'' (synonyms: ''ECK2205, b2213, JW2201'')<ref name='LIB:Riley_2006'/>
''ada''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[ada:Gene_Product(s)|Ada product]]<ref name='LIB:Riley_2006'/>: fused DNA-binding transcriptional dual regulator product, O6-methylguanine-DNA methyltransferase product, B2213 product
''ECK2205, b2213, JW2201''<ref name='LIB:Riley_2006'/>, JW2201''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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Ada transcriptional dual regulator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
Ada transcriptional dual regulator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


O6-methylguanine-DNA methyltransferase, transcription factor; inducible; DNA repair against methylating and alkylating agents; binds Zn(II)<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''fused DNA-binding transcriptional dual regulator<ref name='LIB:Riley_2006'/>, O6-methylguanine-DNA methyltransferase<ref name='LIB:Riley_2006'/>, B2213<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Ada<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2205, JW2201, b2213''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:ada-alkB|ada-alkB]]<ref name='LIB:EcoCyc10.6'/>, OP00100  
transcription unit(s): [[:Category:Txn_unit:ada-alkB|ada-alkB]]<ref name='LIB:EcoCyc10.6'/>, OP00100  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ada&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10029]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000026&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ada&loc=MG1655%3A2308427..2307363,W3110%3A2313739..2312675,REL606%3A2260509..2259445,DH10B%3A2399415..2398351,BW2952%3A2193168..2194232]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2193168&end=2194232&gene=ada&aa=mkkatcltddqrwqsvlardpnadgefvfavrttgifcrpscrarhalrenvsfyanasealaagfrpckrcqpekanaqqhrldkithacrlleqetpvtlealadqvamspfhlhrlfkattgmtpkawqqawrarrlreslakgesvttsilnagfpdsssyyrkadetlgmtakqfrhggenlavryaladcelgrclvaesergicaillgdddatliselqqmfpaadnapadlmfqqhvreviaslnqrdtpltlpldirgtafqqqvwqalrtipcgetvsyqqlanaigkpkavravasacaanklaiiipchrvvrgdgtlsgyrwgvsrkaqllrreaeneer]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ada+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ada]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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The Ada N-terminal domain acts as a transcriptional activator of ada, alkA, alkB and aidB. Ogt, Ada-C and YbaZ are homologous.<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:53, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ada

Gene Synonym(s)

ECK2205, b2213, JW2201[1], JW2201

Product Desc.

Ada transcriptional dual regulator[2][3]

O6-methylguanine-DNA methyltransferase, transcription factor; inducible; DNA repair against methylating and alkylating agents; binds Zn(II)[4]

Product Synonyms(s)

fused DNA-binding transcriptional dual regulator[1], O6-methylguanine-DNA methyltransferase[1], B2213[2][1], Ada[2][1] , ECK2205, JW2201, b2213

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ada-alkB[2], OP00100

Regulation/Activity
Quick Links



        

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Notes

[back to top]


The Ada N-terminal domain acts as a transcriptional activator of ada, alkA, alkB and aidB. Ogt, Ada-C and YbaZ are homologous.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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