arcA:Quickview: Difference between revisions

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{|   id="T49aee01a0d426"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[arcA:Gene|''arcA]]'' (synonyms: ''ECK4393, b4401, JW4364, dye, fexA, msp, seg, sfrA, cpxC'')<ref name='LIB:Riley_2006'/>
''arcA''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[arcA:Gene_Product(s)|ArcA product, ArcA product]]<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>: B4401 product, negative response regulator of genes in aerobic pathways, (sensors, ArcB and CpxA) product, CpxC product, Dye product, FexA product, Msp product, Seg product, SfrA product, respiration control protein ArcA product, unphosphorylated respiration control protein ArcA product, unmodified respiration control protein ArcA product, ArcA control protein product, dye resistance protein product, aerobic respiration control protein ArcA product
''ECK4393, b4401, JW4364, dye, fexA, msp, seg, sfrA, cpxC''<ref name='LIB:Riley_2006'/>, cpxC''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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ArcA transcriptional dual regulator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
ArcA transcriptional dual regulator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
 
DNA-binding response regulator in two-component regulatory system with ArcB or CpxA product
Response regulator, represses aerobic genes anaerobically; also activates some anaerobic genes; phosphorylated by ArcB<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''B4401 <ref name='LIB:EcoCyc10.6'/>, negative response regulator of genes in aerobic pathways, (sensors, ArcB and CpxA) <ref name='LIB:EcoCyc10.6'/>, CpxC <ref name='LIB:EcoCyc10.6'/>, Dye <ref name='LIB:EcoCyc10.6'/>, FexA <ref name='LIB:EcoCyc10.6'/>, Msp <ref name='LIB:EcoCyc10.6'/>, Seg <ref name='LIB:EcoCyc10.6'/>, SfrA <ref name='LIB:EcoCyc10.6'/>, respiration control protein ArcA <ref name='LIB:EcoCyc10.6'/>, unphosphorylated respiration control protein ArcA <ref name='LIB:EcoCyc10.6'/>, unmodified respiration control protein ArcA <ref name='LIB:EcoCyc10.6'/>, ArcA control protein <ref name='LIB:EcoCyc10.6'/>, dye resistance protein <ref name='LIB:EcoCyc10.6'/>, aerobic respiration control protein ArcA <ref name='LIB:EcoCyc10.6'/> , cpxC, dye, ECK4393, fexA, JW4364, msp, seg, sfrA, b4401''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:arcA|arcA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:arcA|arcA]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=arcA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10061]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000057&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=arcA&loc=MG1655%3A4638329..4637613,W3110%3A4644986..4644270,REL606%3A4628466..4627750,DH10B%3A4684791..4684075,BW2952%3A4576097..4576813]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4576097&end=4576813&gene=arcA&aa=mqtphilivedelvtrntlksifeaegydvfeatdgaemhqilseydinlvimdinlpgknglllarelreqanvalmfltgrdnevdkilgleigaddyitkpfnpreltirarnllsrtmnlgtvseerrsvesykfngweldinsrsligpdgeqyklprseframlhfcenpgkiqsraellkkmtgrelkphdrtvdvtirrirkhfestpdtpeiiatihgegyrfcgdled]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=arcA+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=arcA]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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==References==
==References==
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Latest revision as of 21:53, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

arcA

Gene Synonym(s)

ECK4393, b4401, JW4364, dye, fexA, msp, seg, sfrA, cpxC[1], cpxC

Product Desc.

ArcA transcriptional dual regulator[2][3] DNA-binding response regulator in two-component regulatory system with ArcB or CpxA product Response regulator, represses aerobic genes anaerobically; also activates some anaerobic genes; phosphorylated by ArcB[4]

Product Synonyms(s)

B4401 [2], negative response regulator of genes in aerobic pathways, (sensors, ArcB and CpxA) [2], CpxC [2], Dye [2], FexA [2], Msp [2], Seg [2], SfrA [2], respiration control protein ArcA [2], unphosphorylated respiration control protein ArcA [2], unmodified respiration control protein ArcA [2], ArcA control protein [2], dye resistance protein [2], aerobic respiration control protein ArcA [2] , cpxC, dye, ECK4393, fexA, JW4364, msp, seg, sfrA, b4401

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): arcA[2]

Regulation/Activity
Quick Links



        

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Notes

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References

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  1. ↑ Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 2.12 2.13 2.14 2.15 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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