asnB:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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{| id="J49aee09e2b6de"  class=" tableEdit New_Quickview_Table"   
{|   id="J49aee09e2b6de"  class=" tableEdit New_Quickview_Table"   


|-
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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''asnB''  
''asnB''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0662, b0674, JW0660''<ref name='LIB:Riley_2006'/>
''ECK0662, b0674, JW0660''<ref name='LIB:Riley_2006'/>, JW0660''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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asparagine synthetase B<ref name='LIB:Riley_2006'/>, B0674<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AsnB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''asparagine synthetase B<ref name='LIB:Riley_2006'/>, B0674<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AsnB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0662, JW0660, b0674''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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'''Biological Process'''
<GO_nr />
* GO:0006529 asparagine biosynthetic process ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0008652 amino acid biosynthetic process ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0009063 amino acid catabolic process ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0006541 glutamine metabolic process ([http://www.geneontology.org/GO.evidence.shtml IMP])
'''Cellular Component'''
* GO:0005737 cytoplasm ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Molecular Function'''
* GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0005524 ATP binding ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0016597 amino acid binding ([http://www.geneontology.org/GO.evidence.shtml IDA])
 
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=asnB&loc=MG1655:698400..696736,W3110:699599..697935,DH10B:750992..749328,REL606:681272..679608 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=681272&end=679608&gene=asnB&aa=mcsifgvfdiktdavelrkkalelsrlmrhrgpdwsgiyasdnailaherlsivdvnagaqplynqqkthvlavngeiynhqalraeygdryqfqtgsdcevilalyqekgpeflddlqgmfafalydsekdayligrdhlgiiplymgydehgqlyvasemkalvpvcrtikefpagsylwsqdgeirsyyhrdwfdydavkdnvtdknelrqaledsvkshlmsdvpygvllsggldssiisaitkkyaarrvedqerseawwpqlhsfavglpgspdlkaaqevanhlgtvhheihftvqegldairdviyhietydvttirastpmylmsrkikamgikmvlsgegsdevfggylyfhkapnakelheetvrkllalhmydcarankamsawgvearvpfldkkfldvamrinpqdkmcgngkmekhilrecfeaylpasvawrqkeqfsdgvgyswidtlkevaaqqvsdqqletarfrfpyntptskeaylyreifeelfplpsaaecvpggpsvacssakaiewdeafkkmddpsgravgvhqsayk Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=asnB+AND+escherichia+coli Pubmed(asnB)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=asnB Textpresso(asnB)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=asnB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10092]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000088&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=asnB&loc=MG1655%3A698400..696736,W3110%3A699599..697935,DH10B%3A750992..749328,REL606%3A681272..679608,BW2952%3A599496..601160]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=599496&end=601160&gene=asnB&aa=mcsifgvfdiktdavelrkkalelsrlmrhrgpdwsgiyasdnailaherlsivdvnagaqplynqqkthvlavngeiynhqalraeygdryqfqtgsdcevilalyqekgpeflddlqgmfafalydsekdayligrdhlgiiplymgydehgqlyvasemkalvpvcrtikefpagsylwsqdgeirsyyhrdwfdydavkdnvtdknelrqaledsvkshlmsdvpygvllsggldssiisaitkkyaarrvedqerseawwpqlhsfavglpgspdlkaaqevanhlgtvhheihftvqegldairdviyhietydvttirastpmylmsrkikamgikmvlsgegsdevfggylyfhkapnakelheetvrkllalhmydcarankamsawgvearvpfldkkfldvamrinpqdkmcgngkmekhilrecfeaylpasvawrqkeqfsdgvgyswidtlkevaaqqvsdqqletarfrfpyntptskeaylyreifeelfplpsaaecvpggpsvacssakaiewdeafkkmddpsgravgvhqsayk]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=asnB+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=asnB]]&nbsp;&nbsp;


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AsnA and AsnB are redundant; an asparagine auxotrophy requires that both genes be mutated. Although ammonia can be utilized, glutamine is the preferred substrate.<ref name='LIB:EcoGene'/>
AsnA and AsnB are redundant; an asparagine auxotrophy requires that both genes be mutated. Although ammonia can be utilized, glutamine is the preferred substrate.<ref name='LIB:EcoGene'/>


AsnB functions to continue Asparagine synthesis during nitrogen-limited growth. <ref name='PMID: 6125499'/>




<noinclude>
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==References==
==References==
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{{BacktoTop}}

Latest revision as of 21:52, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

asnB

Gene Synonym(s)

ECK0662, b0674, JW0660[1], JW0660

Product Desc.

AsnB[2][3];

Component of asparagine synthetase B[2][3]

Asparagine synthase B [glutamine-hydrolyzing][4]

Product Synonyms(s)

asparagine synthetase B[1], B0674[2][1], AsnB[2][1] , ECK0662, JW0660, b0674

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): asnB[2]

Regulation/Activity
Quick Links



        

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Notes

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AsnA and AsnB are redundant; an asparagine auxotrophy requires that both genes be mutated. Although ammonia can be utilized, glutamine is the preferred substrate.[4]

AsnB functions to continue Asparagine synthesis during nitrogen-limited growth. [5]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ Reitzer, LJ & Magasanik, B (1982) Asparagine synthetases of Klebsiella aerogenes: properties and regulation of synthesis. J. Bacteriol. 151 1299-313 PubMed
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