cpdB:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''cpdB''  
''cpdB''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK4209, b4213, JW4171''<ref name='LIB:Riley_2006'/>
''ECK4209, b4213, JW4171''<ref name='LIB:Riley_2006'/>, JW4171''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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2':3'-cyclic-nucleotide 2'-phosphodiesterase product<ref name='LIB:Riley_2006'/>, B4213 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CpdB product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''2':3'-cyclic-nucleotide 2'-phosphodiesterase<ref name='LIB:Riley_2006'/>, B4213<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CpdB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK4209, JW4171, b4213''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=cpdB&loc=MG1655:4434588..4432645,W3110:4441245..4439302,REL606:4421559..4419616,DH10B:4534950..4533007 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4534950&end=4533007&gene=cpdB&aa=mikfsatllatliaasvnaatvdlrimettdlhsnmmdfdyykdtatekfglvrtaslindarnevknsvlvdngdliqgspladymsakglkagdihpvykalntldytvgtlgnhefnygldylknalagakfpyvnanvidartkqpmftpylikdtevvdkdgkkqtlkigyigvvppqimgwdkanlsgkvtvnditetvrkyvpemrekgadvvvvlahsglsadpykvmaensvyylseipgvnaimfghahavfpgkdfadiegadiakgtlngvpavmpgmwgdhlgvvdlqlsndsgkwqvtqakaearpiydiankkslaaedsklvetlkadhdatrqfvskpigksadnmysylalvqddptvqvvnnaqkayvehyiqgdpdlaklpvlsaaapfkvggrkndpasyvevekgqltfrnaadlylypntlivvkasgkevkewlecsagqfnqidpnstkpqslinwdgfrtynfdvidgvnyqidvtqparydgecqminanaeriknltfngkpidpnamflvatnnyrayggkfagtgdshiafaspdenrsvlaawiadeskrageihpaadnnwrlapiagdkkldirfetspsdkaaafikekgqypmnkvatddigfaiyqvdlsk Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=cpdB+AND+escherichia+coli Pubmed(cpdB)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=cpdB Textpresso(cpdB)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=cpdB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10160]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000156&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=cpdB&loc=MG1655%3A4434588..4432645,W3110%3A4441245..4439302,REL606%3A4421559..4419616,DH10B%3A4534950..4533007,BW2952%3A4371380..4373323]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4371380&end=4373323&gene=cpdB&aa=mikfsatllatliaasvnaatvdlrimettdlhsnmmdfdyykdtatekfglvrtaslindarnevknsvlvdngdliqgspladymsakglkagdihpvykalntldytvgtlgnhefnygldylknalagakfpyvnanvidartkqpmftpylikdtevvdkdgkkqtlkigyigvvppqimgwdkanlsgkvtvnditetvrkyvpemrekgadvvvvlahsglsadpykvmaensvyylseipgvnaimfghahavfpgkdfadiegadiakgtlngvpavmpgmwgdhlgvvdlqlsndsgkwqvtqakaearpiydiankkslaaedsklvetlkadhdatrqfvskpigksadnmysylalvqddptvqvvnnaqkayvehyiqgdpdlaklpvlsaaapfkvggrkndpasyvevekgqltfrnaadlylypntlivvkasgkevkewlecsagqfnqidpnstkpqslinwdgfrtynfdvidgvnyqidvtqparydgecqminanaeriknltfngkpidpnamflvatnnyrayggkfagtgdshiafaspdenrsvlaawiadeskrageihpaadnnwrlapiagdkkldirfetspsdkaaafikekgqypmnkvatddigfaiyqvdlsk]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=cpdB+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=cpdB]]&nbsp;&nbsp;


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Latest revision as of 21:52, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

cpdB

Gene Synonym(s)

ECK4209, b4213, JW4171[1], JW4171

Product Desc.

CPDB- 2',3'-cyclic nucleotide 2'-phosphodiesterase, periplasmic[2]

Product Synonyms(s)

2':3'-cyclic-nucleotide 2'-phosphodiesterase[1], B4213[3][1], CpdB[3][1] , ECK4209, JW4171, b4213

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): cpdB[3], OP00162

Regulation/Activity
Quick Links



        

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Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
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