cydA:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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cytochrome d terminal oxidase, subunit I<ref name='LIB:Riley_2006'/>, B0733<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CydA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''cytochrome d terminal oxidase, subunit I<ref name='LIB:Riley_2006'/>, B0733<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CydA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0721, JW0722, b0733''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=cydA&loc=MG1655:770681..772249,W3110:771880..773448,DH10B:823273..824841,REL606:752340..753908 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=752340&end=753908&gene=cydA&aa=mmldivelsrlqfaltamyhflfvpltlgmafllaimetvyvlsgkqiykdmtkfwgklfginfalgvatgltmefqfgtnwsyyshyvgdifgaplaieglmafflestfvglfffgwdrlgkvqhmcvtwlvalgsnlsalwilvangwmqnpiasdfnfetmrmemvsfselvlnpvaqvkfvhtvasgyvtgamfilgisawymlkgrdfafakrsfaiaasfgmaavlsvivlgdesgyemgdvqktklaaieaewetqpapaaftlfgipdqeeetnkfaiqipyalgiiatrsvdtpviglkelmvqheerirngmkayslleqlrsgstdqavrdqfnsmkkdlgyglllkrytpnvadateaqiqqatkdsiprvaplyfafrimvacgflllaiialsfwsvirnrigekkwllraalygiplpwiaveagwfvaeygrqpwaigevlptavanssltagdlifsmvlicglytlflvaelflmfkfarlgpsslktgryhfeqsstttqpar Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=cydA+AND+escherichia+coli Pubmed(cydA)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/dev/search?q=cydA Textpresso(cydA)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=cydA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10173]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000168&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=cydA&loc=MG1655%3A770681..772249,W3110%3A771880..773448,DH10B%3A823273..824841,REL606%3A752340..753908,BW2952%3A673441..675009]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=673441&end=675009&gene=cydA&aa=mmldivelsrlqfaltamyhflfvpltlgmafllaimetvyvlsgkqiykdmtkfwgklfginfalgvatgltmefqfgtnwsyyshyvgdifgaplaieglmafflestfvglfffgwdrlgkvqhmcvtwlvalgsnlsalwilvangwmqnpiasdfnfetmrmemvsfselvlnpvaqvkfvhtvasgyvtgamfilgisawymlkgrdfafakrsfaiaasfgmaavlsvivlgdesgyemgdvqktklaaieaewetqpapaaftlfgipdqeeetnkfaiqipyalgiiatrsvdtpviglkelmvqheerirngmkayslleqlrsgstdqavrdqfnsmkkdlgyglllkrytpnvadateaqiqqatkdsiprvaplyfafrimvacgflllaiialsfwsvirnrigekkwllraalygiplpwiaveagwfvaeygrqpwaigevlptavanssltagdlifsmvlicglytlflvaelflmfkfarlgpsslktgryhfeqsstttqpar]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=cydA+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=cydA]]&nbsp;&nbsp;


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Latest revision as of 21:51, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

cydA

Gene Synonym(s)

ECK0721, b0733, JW0722, cyd-1[1]

Product Desc.

cytochrome bd-I terminal oxidase subunit I[2][3];

Component of cytochrome bd-I terminal oxidase[2][3]

Cytochrome d (bd-I) terminal oxidase subunit I; upregulated in biofilms and microaerobic conditions; aerobically repressed by H-NS; anaerobically repressed by Fnr[4]

Product Synonyms(s)

cytochrome d terminal oxidase, subunit I[1], B0733[2][1], CydA[2][1] , ECK0721, JW0722, b0733

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): cydAB[2], OP00140

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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H-NS, Fnr and ArcA regulons. ArcA-P antagonizes H-NS repression of cydAB in response to limiting oxygen. Biofilm microarray result was validated with RT-PCR. HT_Cmplx29_Mem: AppC+CydA.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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