dcrB:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''dcrB''  
''dcrB''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK3456, b3472, JW5682, yhhR''<ref name='LIB:Riley_2006'/>
''ECK3456, b3472, JW5682, yhhR''<ref name='LIB:Riley_2006'/>, yhhR''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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periplasmic protein<ref name='LIB:Riley_2006'/>, B3472<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhhR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DcrB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''periplasmic protein<ref name='LIB:Riley_2006'/>, B3472<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhhR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DcrB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3456, JW5682, yhhR, b3472''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=dcrB&loc=MG1655:3607978..3608535,W3110:4030460..4029903,DH10B:3705723..3706280,REL606:3540643..3541200 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3540643&end=3541200&gene=dcrB&aa=mirwmneplwpfierkksmrnlvkyvgigllvmglaacddkdtnataqgsvaesnatgnpvnlldgklsfslpadmtdqsgklgtqannmhvwsdatgqkavivimgddpkedlavlakrledqqrsrdpqlqvvtnkaielkghkmqqldsiisakgqtayssvilgnvgnqlltmqitlpaddqqkaqttaeniintlviq Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=dcrB+AND+escherichia+coli Pubmed(dcrB)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=dcrB Textpresso(dcrB)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=dcrB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7767]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120004304&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=dcrB&loc=MG1655%3A3607978..3608535,W3110%3A4030460..4029903,DH10B%3A3705723..3706280,REL606%3A3540643..3541200,BW2952%3A3496472..3497029]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3496472&end=3497029&gene=dcrB&aa=mirwmneplwpfierkksmrnlvkyvgigllvmglaacddkdtnataqgsvaesnatgnpvnlldgklsfslpadmtdqsgklgtqannmhvwsdatgqkavivimgddpkedlavlakrledqqrsrdpqlqvvtnkaielkghkmqqldsiisakgqtayssvilgnvgnqlltmqitlpaddqqkaqttaeniintlviq]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=dcrB+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=dcrB]]&nbsp;&nbsp;


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Latest revision as of 21:51, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

dcrB

Gene Synonym(s)

ECK3456, b3472, JW5682, yhhR[1], yhhR

Product Desc.

conserved protein involved in bacteriophage adsorption[2][3]

Probable lipoprotein required for phage C1 adsorption; periplasmic; Cys conserved[4]

Product Synonyms(s)

periplasmic protein[1], B3472[2][1], YhhR[2][1], DcrB[2][1] , ECK3456, JW5682, yhhR, b3472

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): dcrB[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


First 19 aa are predicted to be a type II signal peptide. Predicted to be anchored to the inner membrane. HT_Cmplx43_Mem: DcrB+MoaB+OsmE+Slp+YajG+YraP.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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