der:Quickview: Difference between revisions
Jump to navigation
Jump to search
touch QV table |
touch |
||
| (3 intermediate revisions by the same user not shown) | |||
| Line 23: | Line 23: | ||
* ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | * ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | ||
* | * | ||
****************************************************************************************** --> | ****************************************************************************************** --> | ||
{| id="J49aee3972af55" class=" tableEdit New_Quickview_Table" | {| id="J49aee3972af55" class=" tableEdit New_Quickview_Table" | ||
| Line 33: | Line 33: | ||
!align=left {{table_heading_style}} |Gene Synonym(s) | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
|| | || | ||
''ECK2507, b2511, JW5403, engA, yfgK''<ref name='LIB:Riley_2006'/> | ''ECK2507, b2511, JW5403, engA, yfgK''<ref name='LIB:Riley_2006'/>, yfgK'' | ||
|- | |- | ||
!align=left {{table_heading_style}} |Product Desc. | !align=left {{table_heading_style}} |Product Desc. | ||
| Line 43: | Line 43: | ||
!align=left {{table_heading_style}} |Product Synonyms(s) | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
|| | || | ||
predicted GTP-binding protein<ref name='LIB:Riley_2006'/>, B2511<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Der<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YfgK<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, EngA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ''predicted GTP-binding protein<ref name='LIB:Riley_2006'/>, B2511<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Der<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YfgK<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, EngA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2507, engA, JW5403, yfgK, b2511'' | ||
|- | |- | ||
!align=left {{table_heading_style}} |Function from GO | !align=left {{table_heading_style}} |Function from GO | ||
| Line 63: | Line 63: | ||
!align=left {{table_heading_style}} |Quick Links | !align=left {{table_heading_style}} |Quick Links | ||
|| | || | ||
[http://ecoliwiki.net/tools/display_dna.php?gene=der&loc=MG1655 | [[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=der&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7319]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003891&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=der&loc=MG1655%3A2635378..2633906,W3110%3A2636012..2634540,DH10B%3A2727143..2725671,BW2952%3A2519711..2521183]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2519711&end=2521183&gene=der&aa=mrclmiyknealnmvpvvalvgrpnvgkstlfnrltrtrdalvadfpgltrdrkygraeiegreficidtggidgtedgvetrmaeqsllaieeadvvlfmvdaraglmpadeaiakhlrsrekptflvanktdgldpdqavvdfyslglgeiypiaashgrgvlsllehvllpwmedlapqeevdedaeywaqfeaeengeeeeeddfdpqslpiklaivgrpnvgkstltnrilgeervvvydmpgttrdsiyipmerdgreyvlidtagvrkrgkitdavekfsviktlqaiedanvvmlvidaregisdqdlsllgfilnsgrslvivvnkwdglsqevkeqvketldfrlgfidfarvhfisalhgsgvgnlfesvreaydsstrrvgtsmltrimtmavedhqpplvrgrrvklkyahaggynppivvihgnqvkdlpdsykrylmnyfrksldvmgspiriqfkegenpyankrntltptqmrkrkrlmkhikknk]] [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=der+AND+escherichia+coli]] [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=der]] | ||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
Latest revision as of 21:51, 27 May 2013
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
| Standard Name |
der |
|---|---|
| Gene Synonym(s) |
ECK2507, b2511, JW5403, engA, yfgK[1], yfgK |
| Product Desc. |
50S ribosomal subunit stability factor[2][3] Multicopy suppressor of ftsJ; depleted cells form filaments with defective chromosome segregation; GTPase[4] |
| Product Synonyms(s) |
predicted GTP-binding protein[1], B2511[2][1], Der[2][1], YfgK[2][1], EngA[2][1] , ECK2507, engA, JW5403, yfgK, b2511 |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
|
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Der-depletion alters ribosome stability and/or biogenesis, as evidenced by polysome profiles (Bharat, 2006). Der has two tandem GTP-binding domains. der is an essential gene.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.