fis:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK3248, b3261, JW3229, nbp''<ref name='LIB:Riley_2006'/>
''ECK3248, b3261, JW3229, nbp''<ref name='LIB:Riley_2006'/>, nbp''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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global DNA-binding transcriptional dual regulator<ref name='LIB:Riley_2006'/>, B3261<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Nbp<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Fis<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, site-specific DNA inversion stimulation factor; DNA-binding protein; a trans activator for transcription<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''global DNA-binding transcriptional dual regulator<ref name='LIB:Riley_2006'/>, B3261<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Nbp<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Fis<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, site-specific DNA inversion stimulation factor; DNA-binding protein; a trans activator for transcription<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3248, JW3229, nbp, b3261''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=fis&loc=MG1655:3409293..3409589,W3110:3411126..3411422,DH10B:3507038..3507334,REL606:3339162..3339458,BW2952:3296441..3296737 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3296441&end=3296737&gene=fis&aa=mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqtraalmmginrgtlrkklkkygmn Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=fis+AND+escherichia+coli Pubmed(fis)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/search?q=fis Textpresso(fis)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=fis&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10317]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000311&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=fis&loc=MG1655%3A3409293..3409589,W3110%3A3411126..3411422,DH10B%3A3507038..3507334,REL606%3A3339162..3339458,BW2952%3A3296441..3296737]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3296441&end=3296737&gene=fis&aa=mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqtraalmmginrgtlrkklkkygmn]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=fis+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=fis]]&nbsp;&nbsp;


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Latest revision as of 21:50, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

fis

Gene Synonym(s)

ECK3248, b3261, JW3229, nbp[1], nbp

Product Desc.

Fis transcriptional dual regulator[2][3]

Transcriptional activator for rRNA operons, bends DNA; interacts with RNAP; nucleoid-associated protein; dimeric[4]

Product Synonyms(s)

global DNA-binding transcriptional dual regulator[1], B3261[2][1], Nbp[2][1], Fis[2][1], site-specific DNA inversion stimulation factor; DNA-binding protein; a trans activator for transcription[2][1] , ECK3248, JW3229, nbp, b3261

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): dusB-fis[2], OP00028, fis, yhdG-fis

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


fis transcription is supercoiling-dependent. Overexpression causes filamentous biofilm formation. Decreased levels of Fis inhibit open complex formation, inhibiting oriC unwinding by blocking IHF and DnaA low affinity binding sites. Polyamine modulon. Mutations affect chromosomal supercoliing.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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