sixA:Quickview: Difference between revisions

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{|{{Prettytable}}
{|   id="X49b0253e1f0f2"  class=" tableEdit New_Quickview_Table" 
 
|-
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[sixA:Gene|''sixA]]'' (synonyms: ''ECK2334, b2340, JW2337, yfcY, yfcW'')<ref name='LIB:Riley_2006'/>
''sixA''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[sixA:Gene_Product(s)|SixA product]]<ref name='LIB:Riley_2006'/>: phosphohistidine phosphatase product, B2340 product, YfcW product
''ECK2334, b2340, JW2337, yfcY, yfcW''<ref name='LIB:Riley_2006'/>, yfcW''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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G7211-MONOMER<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
G7211<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Phosphohistidine phosphatase affecting ArcB H-D phosphorelay; targets Hpt domain<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''phosphohistidine phosphatase<ref name='LIB:Riley_2006'/>, B2340<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YfcW<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SixA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2334, JW2337, yfcW, b2340''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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|-
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:sixA|sixA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:sixA|sixA]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=sixA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7211]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003786&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=sixA&loc=MG1655%3A2454834..2454349,W3110%3A2462258..2461773,REL606%3A2400476..2399991,DH10B%3A2546599..2546114,BW2952%3A2340154..2340639]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2340154&end=2340639&gene=sixA&aa=mqvfimrhgdaaldaasdsvrplttngcdesrlmanwlkgqkveiervlvspflraeqtleevgdclnlpssaevlpeltpcgdvglvsaylqaltnegvasvlvishlplvgylvaelcpgetppmfttsaiasvtldesgngtfnwqmspcnlkmakai]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=sixA+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=sixA]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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SixA overexpression also interferes with BarA Hpt function (Ogina, 1998). Other SixA substrates are possible but unknown.<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:46, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

sixA

Gene Synonym(s)

ECK2334, b2340, JW2337, yfcY, yfcW[1], yfcW

Product Desc.

G7211[2][3]

Phosphohistidine phosphatase affecting ArcB H-D phosphorelay; targets Hpt domain[4]

Product Synonyms(s)

phosphohistidine phosphatase[1], B2340[2][1], YfcW[2][1], SixA[2][1] , ECK2334, JW2337, yfcW, b2340

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): sixA[2]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


SixA overexpression also interferes with BarA Hpt function (Ogina, 1998). Other SixA substrates are possible but unknown.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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