ubiG:Quickview: Difference between revisions

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{|   id="N49b027a42809e"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[ubiG:Gene|''ubiG]]'' (synonyms: ''ECK2224, b2232, JW2226, yfaB, pufX'')<ref name='LIB:Riley_2006'/>
''ubiG''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[ubiG:Gene_Product(s)|UbiG product]]<ref name='LIB:Riley_2006'/>: bifunctional 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase product, B2232 product, PufX product, YfaB product
''ECK2224, b2232, JW2226, yfaB, pufX''<ref name='LIB:Riley_2006'/>, pufX''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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UbiG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
UbiG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:3-demethylubiquinone 3-methyltransferase|3-demethylubiquinone 3-methyltransferase]]<ref name='LIB:EcoCyc10.6'/>
Component of [[:Category:Complex:3-demethylubiquinone 3-methyltransferase|3-demethylubiquinone 3-methyltransferase]]<ref name='LIB:EcoCyc10.6'/>; [[:Category:Complex:3-demethylubiquinone 3-methyltransferase|bifunctional 3-demethylubiquinone-<i>8</i> 3-<i>O</i>-methyltransferase and 2-octaprenyl-6-hydroxyphenol methylase]]<ref name='LIB:EcoCyc11.1'/>


SAM:OMHMB methyltransferase; Reactions: 2-octaprenyl-6-hydroxylphenol to 2-octaprenyl-6-methoxyphenol; 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinone to ubiquinone 8<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''bifunctional 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase<ref name='LIB:Riley_2006'/>, B2232<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PufX<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YfaB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, UbiG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2224, JW2226, pufX, yfaB, b2232''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:ubiG|ubiG]]<ref name='LIB:EcoCyc10.6'/>, OP00168  
transcription unit(s): [[:Category:Txn_unit:ubiG|ubiG]]<ref name='LIB:EcoCyc10.6'/>, OP00168  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ubiG&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11143]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001127&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ubiG&loc=MG1655%3A2337589..2338311,W3110%3A2344237..2344959,REL606%3A2286267..2286989,DH10B%3A2428577..2429299,BW2952%3A2223394..2224116]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2223394&end=2224116&gene=ubiG&aa=mnaekspvnhnvdheeiakfeavasrwwdlegefkplhrinplrlgyiaeragglfgkkvldvgcgggilaesmaregatvtgldmgfeplqvaklhalesgiqvdyvqetveehaakhagqydvvtcmemlehvpdpqsvvracaqlvkpggdvffstlnrngkswlmavvgaeyilrmvpkgthdvkkfikpaellgwvdqtslkerhitglhynpitntfklgpgvdvnymlhtqnk]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ubiG+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ubiG]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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==References==
==References==
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Latest revision as of 21:45, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ubiG

Gene Synonym(s)

ECK2224, b2232, JW2226, yfaB, pufX[1], pufX

Product Desc.

UbiG[2][3];

Component of 3-demethylubiquinone 3-methyltransferase[2]; bifunctional 3-demethylubiquinone-8 3-O-methyltransferase and 2-octaprenyl-6-hydroxyphenol methylase[3]

SAM:OMHMB methyltransferase; Reactions: 2-octaprenyl-6-hydroxylphenol to 2-octaprenyl-6-methoxyphenol; 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinone to ubiquinone 8[4]

Product Synonyms(s)

bifunctional 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase[1], B2232[2][1], PufX[2][1], YfaB[2][1], UbiG[2][1] , ECK2224, JW2226, pufX, yfaB, b2232

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ubiG[2], OP00168

Regulation/Activity
Quick Links



        

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Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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