uhpB:Quickview: Difference between revisions

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{{Tab On|Quickview|uhpB}}{{Tab|Gene|uhpB}}{{Tab|Gene Product(s)|uhpB}}{{Tab|Expression|uhpB}}{{Tab|Evolution|uhpB}}{{Tab|On One Page|uhpB}}{{TabsBottom}}
{{Tab On|Quickview|uhpB}}{{Tab|Gene|uhpB}}{{Tab|Gene Product(s)|uhpB}}{{Tab|Expression|uhpB}}{{Tab|Evolution|uhpB}}{{Tab|On One Page|uhpB}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[uhpB:Gene|''uhpB]]'' (synonyms: ''ECK3659, b3668, JW3643, uhpR'')<ref name='LIB:Riley_2006'/>
''uhpB''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[uhpB:Gene_Product(s)|UhpB product, UhpB product]]<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>: B3668 product, sensor protein UhpB product, sensor kinase-phosphotransferase UhpB product, unphosphorylated sensor kinase-phosphotransferase UhpB product, unmodified sensor kinase-phosphotransferase UhpB product
''ECK3659, b3668, JW3643, uhpR''<ref name='LIB:Riley_2006'/>
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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UhpB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
UhpB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Membrane protein controlling UhpA activity, sensor kinase<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''B3668<ref name='LIB:EcoCyc10.6'/>, sensor protein UhpB<ref name='LIB:EcoCyc10.6'/>, sensor kinase-phosphotransferase UhpB<ref name='LIB:EcoCyc10.6'/>, unphosphorylated sensor kinase-phosphotransferase UhpB<ref name='LIB:EcoCyc10.6'/>, unmodified sensor kinase-phosphotransferase UhpB<ref name='LIB:EcoCyc10.6'/> , ECK3659, JW3643, b3668''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:uhpABC|uhpABC]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:uhpABC|uhpABC]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=uhpB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11052]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001041&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=uhpB&loc=MG1655%3A3848159..3846657,W3110%3A3790279..3791781,REL606%3A3810068..3808566,DH10B%3A3945743..3944241,BW2952%3A3734990..3736492]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3734990&end=3736492&gene=uhpB&aa=mmktlfsrlitviacffifsaawfclwsislhlverpdmavllfpfglrlglmlqcprgywpvllgaewlliywltqavglthfpllmigslltllpvalisryrhqrdwrtlllqgaaltaaallqslpwlwhgkeswnallltltggltlapiclvfwhylanntwlplgpslvsqpinwrgrhlvwylllfvislwlqlglpdelsrftpfclalpiialawhygwqgaliatlmnaialiasqtwrdhpvdlllsllvqsltglllgagiqrlrelnqslqkelarnqhlaerlleteesvrrdvarelhddigqtitairtqagivqrlaadnasvkqsgqlieqlslgvydavrrllgrlrprqlddltleqairslmremelegrgivshlewridesalsenqrvtlfrvcqeglnnivkhadasavtlqgwqqderlmlvieddgsglppgsgqqgfgltgmrervtalggtlhisclhgtrvsvslpqryv]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=uhpB+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=uhpB]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
Probable false positive lipoprotein prediction, Cys not conserved, 10 CM TMs predicted.<ref name='LIB:EcoGene'/>
 




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==References==
==References==
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Latest revision as of 21:45, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

uhpB

Gene Synonym(s)

ECK3659, b3668, JW3643, uhpR[1]

Product Desc.

UhpB[2][3]

Membrane protein controlling UhpA activity, sensor kinase[4]

Product Synonyms(s)

B3668[2], sensor protein UhpB[2], sensor kinase-phosphotransferase UhpB[2], unphosphorylated sensor kinase-phosphotransferase UhpB[2], unmodified sensor kinase-phosphotransferase UhpB[2] , ECK3659, JW3643, b3668

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): uhpABC[2]

Regulation/Activity
Quick Links



        

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Probable false positive lipoprotein prediction, Cys not conserved, 10 CM TMs predicted.[4]



References

[back to top]


  1. ↑ Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.