yadE:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''yadE''  
''yadE''
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0129, b0130, JW0126''<ref name='LIB:Riley_2006'/>
''ECK0129, b0130, JW0126''<ref name='LIB:Riley_2006'/>, JW0126''
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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predicted polysaccharide deacetylase lipoprotein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
predicted polysaccharide deacetylase lipoprotein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
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Polysaccharide deacetylase-like protein, function unknown<ref name='LIB:EcoGene'/>
Polysaccharide deacetylase-like protein, function unknown<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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predicted polysaccharide deacetylase lipoprotein<ref name='LIB:Riley_2006'/>, B0130<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YadE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''predicted polysaccharide deacetylase lipoprotein<ref name='LIB:Riley_2006'/>, B0130<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YadE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0129, JW0126, b0130''
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:yadE|yadE]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:yadE|yadE]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=yadE&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11749]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001687&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=yadE&loc=MG1655%3A145081..146310,W3110%3A145081..146310,DH10B%3A119185..120414,REL606%3A147884..149113,BW2952%3A145080..146309]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=145080&end=146309&gene=yadE&aa=mykqavilllmlftasvsaalparymqtienaavwaqigdkmvtvgniragqiiaveptaasyyafnfgfgkgfidkghlepvqgrqkvedglgdlnkplsnqnlvtwkdtpvynapsagsapfgvladnlrypilhklkdrlnqtwyqirigdrlayisaldaqpdnglsvltyhhilrdeentrfrhtstttsvrafnnqmawlrdrgyatlsmvqlegyvknkinlparavvitfddglksvsryaypvlkqygmkatafivtsrikrhpqkwnpkslqfmsvselneirdvfdfqshthflhrvdgyrrpillsrsehnilfdfarsrralaqfnphvwylsypfggfndnavkaandagfhlavttmkgkvkpgdnplllkrlyilrtdsletmsrlvsnqpqg]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yadE+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=yadE]]&nbsp;&nbsp;


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Latest revision as of 21:44, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

yadE

Gene Synonym(s)

ECK0129, b0130, JW0126[1], JW0126

Product Desc.

predicted polysaccharide deacetylase lipoprotein[2][3]

Polysaccharide deacetylase-like protein, function unknown[4]

Product Synonyms(s)

predicted polysaccharide deacetylase lipoprotein[1], B0130[2][1], YadE[2][1] , ECK0129, JW0126, b0130

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yadE[2]

Regulation/Activity
Quick Links



        

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Notes

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YadE has a predicted 19 aa signal peptide.Paralogous to pgaB.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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