cysQ:Evolution: Difference between revisions

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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00459 PFAM:PF00459]
[http://pfam.janelia.org/family/PF00459 PF00459 Inositol monophosphatase family]
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[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR20854:SF5 PTHR20854:SF5]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=56655 SUPERFAMILY:56655]
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[[EcoCyc]]
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EcoCyc:EG10043
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10043
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000039
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0041
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0013786
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:38, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000001820 (score: 1.000; bootstrap: 97%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00026489 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00012390 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0189923 (score: 1.000; bootstrap: 56%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0030465 (score: 1.000; bootstrap: 100%)
  • FBgn0039698 (score: 0.105)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA13929-PA (score: 1.000; bootstrap: 100%)
  • GA20589-PA (score: 0.115)

From Inparanoid:20070104

Oryza gramene

  • Q6Z413 (score: 1.000; bootstrap: 99%)
  • Q6Z412 (score: 0.568)
  • Q948F9 (score: 0.062)
  • Q6K841 (score: 0.052)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YOL064C (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPCC17534 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00020318001 (score: 1.000; bootstrap: 100%)
  • GSTENP00013621001 (score: 0.108)
  • GSTENP00006004001 (score: 0.073)

From Inparanoid:20070104

Shigella flexneri

CYSQ

From SHIGELLACYC

E. coli O157

CYSQ

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00459 Inositol monophosphatase family

Panther (EcoliWiki Page)

PTHR20854:SF5

Superfamily (EcoliWiki Page)

SUPERFAMILY:56655

EcoCyc

EcoCyc:EG10043

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10043

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000039

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0041

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0013786

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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