rpe:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00834 PF00834  Ribulose-phosphate 3 epimerase family]
[http://pfam.janelia.org/family/PF00834 PF00834  Ribulose-phosphate 3 epimerase family]
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[[EcoCyc]]
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EcoCyc:M004
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG11960
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120004466
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB1903
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0011061
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:36, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000010041 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT5G61410 (score: 1.000; bootstrap: 95%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000002989 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000017017 (score: 0.066)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00035606 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00017272 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000020367 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000010415 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-030131-6837 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-751 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0231226 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0050499 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA15886-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000352401 (score: 1.000; bootstrap: 100%)
  • ENSP00000286902 (score: 0.938)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000013779 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000010061 (score: 0.186)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000019746 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000012990 (score: 0.770)

From Inparanoid:20070104

Mus musculus

  • MGI:1913896 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q9ZTP5 (score: 1.000; bootstrap: 98%)
  • Q8S7V5 (score: 0.972)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000042222 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000005119 (score: 0.951)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YJL121C (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAC31G55c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000137316 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00026045001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000040162 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

RPE

From SHIGELLACYC

E. coli O157

RPE

From ECOO157CYC

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Superfamily (EcoliWiki Page)

SUPERFAMILY:51366

Panther (EcoliWiki Page)

PTHR11749:SF0

Pfam (EcoliWiki Page)

PF00834 Ribulose-phosphate 3 epimerase family

EcoCyc

EcoCyc:M004

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11960

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120004466

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1903

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0011061

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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