yheT:Evolution: Difference between revisions

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From ECOO157CYC  


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!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00561 PFAM:PF00561]
[http://pfam.janelia.org/family/PF00561 PF00561 alpha/beta hydrolase fold]
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[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10794:SF7 PTHR10794:SF7]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=53474 SUPERFAMILY:53474]
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[[EcoCyc]]
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EcoCyc:G7718
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG12904
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120004263
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB2741
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0010957
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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==References==
==References==
{{BacktoTop}}
{{BacktoTop}}
 
{{RefHelp}}
<references/>
<references />
<noinclude>
__NOTOC__
__NOTOC__
</noinclude>
===Categories===
===Categories===
{{BacktoTop}}
{{BacktoTop}}

Latest revision as of 08:36, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000013379 (score: 1.000; bootstrap: 92%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000015798 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT3G50790 (score: 1.000; bootstrap: 100%)
  • AT1G34340 (score: 0.121)
  • AT5G49950 (score: 0.120)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000007496 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000009303 (score: 0.279)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00029943 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00013358 (score: 1.000; bootstrap: 100%)
  • WBGene00016644 (score: 0.776)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000006965 (score: 1.000; bootstrap: 76%)
  • ENSCAFP00000026955 (score: 0.327)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000015883 (score: 1.000; bootstrap: 80%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040912-90 (score: 1.000; bootstrap: 89%)
  • ZDB-CDNA-040912-92 (score: 1.000; bootstrap: 90%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0188543 (score: 1.000; bootstrap: 100%)
  • DDB0184458 (score: 0.110)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0033382 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA17475-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000024049 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000289119 (score: 1.000; bootstrap: 91%)
  • ENSP00000326491 (score: 1.000; bootstrap: 89%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000005854 (score: 1.000; bootstrap: 57%)
  • ENSMMUP00000003206 (score: 0.193)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000019615 (score: 1.000; bootstrap: 86%)
  • ENSMODP00000026849 (score: 0.284)

From Inparanoid:20070104

Mus musculus

  • MGI:1931013 (score: 1.000; bootstrap: 75%)
  • MGI:2147183 (score: 0.356)

From Inparanoid:20070104

Oryza gramene

  • Q6H6S1 (score: 1.000; bootstrap: 100%)
  • Q6I5U7 (score: 0.121)
  • Q5NA00 (score: 0.112)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000020191 (score: 1.000; bootstrap: 76%)
  • ENSPTRP00000016854 (score: 0.384)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000009339 (score: 1.000; bootstrap: 80%)
  • ENSRNOP00000039335 (score: 0.300)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YPL095C (score: 1.000; bootstrap: 100%)
  • YBR177C (score: 0.542)
  • YMR210W (score: 0.121)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000149924 (score: 1.000; bootstrap: 85%)
  • NEWSINFRUP00000137068 (score: 0.398)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00030354001 (score: 1.000; bootstrap: 72%)
  • GSTENP00007423001 (score: 0.355)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000006831 (score: 1.000; bootstrap: 100%)
  • ENSXETP00000039258 (score: 0.090)

From Inparanoid:20070104

Shigella flexneri

YHET

From SHIGELLACYC

E. coli O157

YHET

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00561 alpha/beta hydrolase fold

Panther (EcoliWiki Page)

PTHR10794:SF7

Superfamily (EcoliWiki Page)

SUPERFAMILY:53474

EcoCyc

EcoCyc:G7718

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12904

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120004263

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2741

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0010957

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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