plsC:Evolution: Difference between revisions

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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF01553 PFAM:PF01553]
[http://pfam.janelia.org/family/PF01553 PF01553 Acyltransferase]
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[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10434:SF0 PTHR10434:SF0]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=69593 SUPERFAMILY:69593]
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[[EcoCyc]]
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EcoCyc:EG11377
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG11377
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120001345
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB1351
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0009910
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:35, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000011242 (score: 1.000; bootstrap: 98%)
  • ENSANGP00000018852 (score: 0.170)
  • ENSANGP00000018875 (score: 0.127)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000024518 (score: 1.000; bootstrap: 100%)
  • ENSAPMP00000023580 (score: 0.403)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT4G30580 (score: 1.000; bootstrap: 52%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000005821 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000035108 (score: 0.177)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00027436 (score: 1.000; bootstrap: 100%)
  • WBGene00036088 (score: 0.100)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00011543 (score: 1.000; bootstrap: 100%)
  • WBGene00010339 (score: 0.110)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000001104 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000028942 (score: 0.153)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0183825 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0026718 (score: 1.000; bootstrap: 100%)
  • FBgn0030421 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA14576-PA (score: 1.000; bootstrap: 100%)
  • GA17703-PA (score: 0.102)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000000375 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000001452 (score: 0.354)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000337463 (score: 1.000; bootstrap: 100%)
  • ENSP00000312239 (score: 0.294)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000024254 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000027618 (score: 0.279)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000018622 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000021952 (score: 0.256)

From Inparanoid:20070104

Mus musculus

  • MGI:1932075 (score: 1.000; bootstrap: 100%)
  • MGI:1914762 (score: 0.265)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000030753 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000000500 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000026408 (score: 0.218)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YDL052C (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAC18512 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000139818 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000011398 (score: 1.000; bootstrap: 96%)
  • ENSXETP00000001688 (score: 0.147)
  • ENSXETP00000025384 (score: 0.111)

From Inparanoid:20070104

Shigella flexneri

PLSC

From SHIGELLACYC

E. coli O157

PLSC

From ECOO157CYC

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF01553 Acyltransferase

Panther (EcoliWiki Page)

PTHR10434:SF0

Superfamily (EcoliWiki Page)

SUPERFAMILY:69593

EcoCyc

EcoCyc:EG11377

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11377

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001345

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1351

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0009910

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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