rlmC:Evolution: Difference between revisions

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Evolution

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism	Homologs (Statistics)	Comments
Arabidopsis thaliana	AT3G21300 (score: 1.000; bootstrap: 89%)	From Inparanoid:20070104
Bos taurus	ENSBTAP00000026476 (score: 1.000; bootstrap: 100%)	From Inparanoid:20070104
Canis familiaris	ENSCAFP00000020907 (score: 1.000; bootstrap: 100%)	From Inparanoid:20070104
Saccharomyces cerevisiae	YKR056W (score: 1.000; bootstrap: 100%)	From Inparanoid:20070104
Schizosaccharomyces pombe	SPAC4G87c (score: 1.000; bootstrap: 100%)	From Inparanoid:20070104
Xenopus tropicalis	ENSXETP00000015318 (score: 1.000; bootstrap: 100%)	From Inparanoid:20070104
Shigella flexneri	YGCA	From SHIGELLACYC
E. coli O157	YGCA	From ECOO157CYC
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Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database	Accession	Notes
Pfam (EcoliWiki Page)	PF01938 TRAM domain
Superfamily (EcoliWiki Page)	SUPERFAMILY:50249
Superfamily (EcoliWiki Page)	SUPERFAMILY:53335
Pfam (EcoliWiki Page)	PF05958 tRNA (Uracil-5-)-methyltransferase
EcoCyc	EcoCyc:G6449	Escherichia coli str. K-12 substr. MG1655
EcoGene	EcoGene:EG13427	Escherichia coli str. K-12 substr. MG1655
RegulonDB	RegulonDB:ECK120003049	Escherichia coli str. K-12 substr. MG1655
EchoBASE	EchoBASE:EB3201	Escherichia coli str. K-12 substr. MG1655
ASAP	ASAP:ABE-0002924	Escherichia coli str. K-12 substr. MG1655
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Notes

Links

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Name	URL	Comments
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References

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See Help:References for how to manage references in EcoliWiki.

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 From ECOO157CYC
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-[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])
+[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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-[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF01938 PFAM:PF01938]
+[http://pfam.janelia.org/family/PF01938 PF01938  TRAM domain]
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+|-
+|
+[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
+|
+[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=50249 SUPERFAMILY:50249]
+|
+|-
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+[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
+|
+[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=53335 SUPERFAMILY:53335]
+|
+|-
+|
+[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
+|
+[http://pfam.janelia.org/family/PF05958 PF05958  tRNA (Uracil-5-)-methyltransferase]
+|
+|-
+|
+[[EcoCyc]]
+|
+EcoCyc:G6449
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+''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
+|-
+|
+[[EcoGene]]
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+EcoGene:EG13427
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+''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
+|-
+|
+[[RegulonDB]]
+|
+RegulonDB:ECK120003049
+|
+''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
+|-
+|
+[[EchoBASE]]
+|
+EchoBASE:EB3201
+|
+''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
+|-
+|
+[[ASAP]]
+|
+ASAP:ABE-0002924
+|
+''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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 ==References==
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+{{RefHelp}}
-<references/>
+<references />
-<noinclude>
 __NOTOC__
-</noinclude>
 ===Categories===
 {{BacktoTop}}

rlmC:Evolution: Difference between revisions

Latest revision as of 08:35, 27 May 2013

Homologs in Other Organisms

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