srmB:Evolution: Difference between revisions

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deleting Pfam from accessions table on evolution pages
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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00271 PF00271  Helicase conserved C-terminal domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00270 PF00270  DEAD/DEAH box helicase]
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[[EcoCyc]]
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EcoCyc:EG10975
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10975
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000964
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0968
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0008478
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:34, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000003952 (score: 1.000; bootstrap: 86%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00031298 (score: 1.000; bootstrap: 72%)
  • WBGene00036557 (score: 0.085)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00008119 (score: 1.000; bootstrap: 53%)
  • WBGene00018776 (score: 0.093)
  • WBGene00010260 (score: 0.054)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0021995 (score: 1.000; bootstrap: 83%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA15282-PA (score: 1.000; bootstrap: 90%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YLL008W (score: 1.000; bootstrap: 74%)

From Inparanoid:20070104

Shigella flexneri

SRMB

From SHIGELLACYC

E. coli O157

SRMB

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00271 Helicase conserved C-terminal domain

Pfam (EcoliWiki Page)

PF00270 DEAD/DEAH box helicase

Superfamily (EcoliWiki Page)

SUPERFAMILY:52540

Superfamily (EcoliWiki Page)

SUPERFAMILY:52540

Panther (EcoliWiki Page)

PTHR24031:SF52

EcoCyc

EcoCyc:EG10975

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10975

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000964

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0968

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0008478

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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