hmp:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00042 PFAM:PF00042]
[http://pfam.janelia.org/family/PF00042 PF00042  Globin]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00970 PF00970  Oxidoreductase FAD-binding domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00175 PF00175  Oxidoreductase NAD-binding domain ]
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[[EcoCyc]]
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EcoCyc:EG10456
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10456
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000449
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0451
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0008396
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:34, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Dictyostelium discoideum

  • DDB0191099 (score: 1.000; bootstrap: 100%)
  • DDB0191088 (score: 0.432)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YGR234W (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAC8692c (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Shigella flexneri

HMPA

From SHIGELLACYC

E. coli O157

HMPA

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00042 Globin

Pfam (EcoliWiki Page)

PF00970 Oxidoreductase FAD-binding domain

Pfam (EcoliWiki Page)

PF00175 Oxidoreductase NAD-binding domain

Superfamily (EcoliWiki Page)

SUPERFAMILY:46458

Superfamily (EcoliWiki Page)

SUPERFAMILY:52343

Panther (EcoliWiki Page)

PTHR22924:SF2

Superfamily (EcoliWiki Page)

SUPERFAMILY:63380

EcoCyc

EcoCyc:EG10456

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10456

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000449

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0451

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0008396

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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