aroA:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00275 PFAM:PF00275]
[http://pfam.janelia.org/family/PF00275 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)]
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[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21090:SF5 PTHR21090:SF5]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=55205 SUPERFAMILY:55205]
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[[EcoCyc]]
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EcoCyc:EG10073
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10073
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000069
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0071
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0003095
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:31, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000025558 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT2G45300 (score: 1.000; bootstrap: 100%)
  • AT1G48860 (score: 0.799)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000012252 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • O24566 (score: 1.000; bootstrap: 100%)
  • Q95AK0 (score: 0.962)
  • Q95AK1 (score: 0.946)
  • Q93VK6 (score: 0.914)
  • Q5VNW0 (score: 0.914)
  • O80428 (score: 0.709)
  • Q9AT37 (score: 0.494)
  • Q6VVA4 (score: 0.296)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YDR127W (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAC18342 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

AROA

From SHIGELLACYC

E. coli O157

AROA

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)

Panther (EcoliWiki Page)

PTHR21090:SF5

Superfamily (EcoliWiki Page)

SUPERFAMILY:55205

EcoCyc

EcoCyc:EG10073

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10073

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000069

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0071

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0003095

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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