glnS:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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{|   id="S46aba9eae99bd"  class=" tableEdit Gene_accessions_table"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="S46aba9eae99bd"  class=" tableEdit Gene_accessions_table"   
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!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00749 PFAM:PF00749]
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=50715 SUPERFAMILY:50715]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=50715 SUPERFAMILY:50715]
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=52374 SUPERFAMILY:52374]
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[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10119:SF15 PTHR10119:SF15]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00749 PF00749  tRNA synthetases class I (E and Q), catalytic domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF03950 PF03950  tRNA synthetases class I (E and Q), anti-codon binding domain]
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[[EcoCyc]]
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EcoCyc:EG10390
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10390
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000383
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0385
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0002317
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:30, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000014418 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000035566 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT1G25350 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000025191 (score: 1.000; bootstrap: 91%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00034482 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00001336 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000017485 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000018529 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040426-1011 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-1942 (score: 0.375)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0201644 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0027090 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA10360-PA (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000015623 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000307567 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000003936 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000016665 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Mus musculus

  • MGI:1915851 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Oryza gramene

  • Q65WY6 (score: 1.000; bootstrap: 99%)
  • Q5VRX8 (score: 0.816)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000025742 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000003252 (score: 1.000; bootstrap: 68%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YOR168W (score: 1.000; bootstrap: 95%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC3422 (score: 1.000; bootstrap: 95%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000173225 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00033251001 (score: 1.000; bootstrap: 95%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000020606 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Shigella flexneri

GLNS

From SHIGELLACYC

E. coli O157

GLNS

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Superfamily (EcoliWiki Page)

SUPERFAMILY:50715

Superfamily (EcoliWiki Page)

SUPERFAMILY:52374

Panther (EcoliWiki Page)

PTHR10119:SF15

Pfam (EcoliWiki Page)

PF00749 tRNA synthetases class I (E and Q), catalytic domain

Pfam (EcoliWiki Page)

PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain

EcoCyc

EcoCyc:EG10390

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10390

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000383

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0385

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0002317

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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