nagB:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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From ECOO157CYC  
From ECOO157CYC  


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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF01182 PFAM:PF01182]
[http://pfam.janelia.org/family/PF01182 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=100950 SUPERFAMILY:100950]
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[[EcoCyc]]
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EcoCyc:EG10633
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10633
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000626
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0627
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0002304
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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==References==
==References==
{{BacktoTop}}
{{BacktoTop}}
 
{{RefHelp}}
<references/>
<references />
<noinclude>
__NOTOC__
__NOTOC__
</noinclude>
===Categories===
===Categories===
{{BacktoTop}}
{{BacktoTop}}

Latest revision as of 08:30, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000027824 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000033350 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT5G24400 (score: 1.000; bootstrap: 100%)
  • AT3G49360 (score: 0.418)
  • AT5G24410 (score: 0.353)
  • AT5G24420 (score: 0.350)
  • AT1G13700 (score: 0.313)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000010347 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000000357 (score: 0.173)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00040062 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00011399 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000002748 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000009366 (score: 0.741)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000018019 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-050417-417 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-050417-418 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0206255 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0031717 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA19983-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000011819 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000022938 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000295448 (score: 1.000; bootstrap: 100%)
  • ENSP00000311876 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000012780 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000012149 (score: 0.374)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000025757 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000013035 (score: 0.404)

From Inparanoid:20070104

Mus musculus

  • MGI:1915230 (score: 1.000; bootstrap: 100%)
  • MGI:1347054 (score: 0.722)
  • MGI:3647532 (score: 0.478)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000027571 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000002992 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000152425 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00017024001 (score: 1.000; bootstrap: 100%)
  • GSTENP00011336001 (score: 0.300)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000009054 (score: 1.000; bootstrap: 100%)
  • ENSXETP00000018475 (score: 0.360)

From Inparanoid:20070104

Shigella flexneri

NAGB

From SHIGELLACYC

E. coli O157

NAGB

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase

Superfamily (EcoliWiki Page)

SUPERFAMILY:100950

EcoCyc

EcoCyc:EG10633

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10633

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000626

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0627

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0002304

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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