proB:Evolution: Difference between revisions

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!Organism!!Homologs (Statistics)!!Comments
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''Saccharomyces cerevisiae''   
''Saccharomyces cerevisiae''   
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From Inparanoid:20070104  
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''Schizosaccharomyces pombe''   
''Schizosaccharomyces pombe''   
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From Inparanoid:20070104  
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''Xenopus tropicalis''   
''Xenopus tropicalis''   
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From Inparanoid:20070104  
From Inparanoid:20070104  
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''Shigella flexneri''   
''Shigella flexneri''   
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From SHIGELLACYC  
From SHIGELLACYC  
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''E. coli'' O157  
''E. coli'' O157  
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From ECOO157CYC  
From ECOO157CYC  
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===Do-It-Yourself Web Tools===
===Do-It-Yourself Web Tools===
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!Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF01472 PF01472  PUA domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00696 PF00696  Amino acid kinase family]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=53633 SUPERFAMILY:53633]
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00696 PFAM:PF00696]
[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11063:SF6 PTHR11063:SF6]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=88697 SUPERFAMILY:88697]
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[[EcoCyc]]
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EcoCyc:EG10768
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10768
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000759
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0761
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0000830
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 
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===Notes===
===Notes===
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==References==
==References==
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===Categories===
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Latest revision as of 08:30, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Saccharomyces cerevisiae

  • YDR300C (score: 1.000; bootstrap: 100%)
  • YHR033W (score: 0.572)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAC17H93c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000013948 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Shigella flexneri

PROB

From SHIGELLACYC

E. coli O157

PROB

From ECOO157CYC

edit table


Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF01472 PUA domain

Pfam (EcoliWiki Page)

PF00696 Amino acid kinase family

Superfamily (EcoliWiki Page)

SUPERFAMILY:53633

Panther (EcoliWiki Page)

PTHR11063:SF6

Superfamily (EcoliWiki Page)

SUPERFAMILY:88697

EcoCyc

EcoCyc:EG10768

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10768

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000759

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0761

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0000830

Escherichia coli str. K-12 substr. MG1655

edit table


Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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