aceF:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?3 of PF00364 PFAM:3 of PF00364]
[http://pfam.janelia.org/family/PF02817 PF02817  e3 binding domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00364 PF00364  Biotin-requiring enzyme]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00198 PF00198  2-oxoacid dehydrogenases acyltransferase (catalytic domain)]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00364 PF00364 Biotin-requiring enzyme]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00364 PF00364 Biotin-requiring enzyme]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=52777 SUPERFAMILY:52777]
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[[EcoCyc]]
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EcoCyc:EG10025
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10025
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000022
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0024
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0000400
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:29, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000023896 (score: 1.000; bootstrap: 85%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000032195 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00026169 (score: 1.000; bootstrap: 80%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00014054 (score: 1.000; bootstrap: 82%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000003451 (score: 1.000; bootstrap: 55%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-030131-2921 (score: 1.000; bootstrap: 64%)
  • ZDB-CDNA-040425-2474 (score: 0.126)
  • ZDB-CDNA-040425-2473 (score: 0.123)
  • ZDB-GENE-040426-1539 (score: 0.123)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0230195 (score: 1.000; bootstrap: 96%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0030612 (score: 1.000; bootstrap: 59%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA18998-PA (score: 1.000; bootstrap: 89%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000010123 (score: 1.000; bootstrap: 63%)

From Inparanoid:20070104

Mus musculus

  • MGI:2385311 (score: 1.000; bootstrap: 64%)
  • MGI:1351627 (score: 0.119)

From Inparanoid:20070104

Oryza gramene

  • Q655Q2 (score: 1.000; bootstrap: 51%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000032890 (score: 1.000; bootstrap: 62%)

From Inparanoid:20070104

Shigella flexneri

ACEF

From SHIGELLACYC

E. coli O157

ACEF

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF02817 e3 binding domain

Pfam (EcoliWiki Page)

PF00364 Biotin-requiring enzyme

Pfam (EcoliWiki Page)

PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain)

Pfam (EcoliWiki Page)

PF00364 Biotin-requiring enzyme

Pfam (EcoliWiki Page)

PF00364 Biotin-requiring enzyme

Superfamily (EcoliWiki Page)

SUPERFAMILY:47005

Superfamily (EcoliWiki Page)

SUPERFAMILY:51230

Superfamily (EcoliWiki Page)

SUPERFAMILY:51230

Superfamily (EcoliWiki Page)

SUPERFAMILY:51230

Panther (EcoliWiki Page)

PTHR23151:SF19

Superfamily (EcoliWiki Page)

SUPERFAMILY:52777

EcoCyc

EcoCyc:EG10025

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10025

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000022

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0024

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0000400

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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