kefF:Evolution: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older edit
/Volumes/r3/t3/ul/phpwikibots/trunk/touch_all_tables.php
touch
 
Line 29: Line 29:
*  
*  
****************************************************************************************** -->{{Evolution_homologs_table_help}}
****************************************************************************************** -->{{Evolution_homologs_table_help}}
{|   id="S46ab96d5b37cd"  class=" tableEdit Evolution_homologs_table"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="S46ab96d5b37cd"  class=" tableEdit Evolution_homologs_table"   
|- {{table heading style}}
|- {{table heading style}}
!|Organism!!Homologs (Statistics)!!Comments
!|Organism!!Homologs (Statistics)!!Comments
Line 173: Line 173:
*  
*  
****************************************************************************************** -->{{Gene_accessions_help}}
****************************************************************************************** -->{{Gene_accessions_help}}
{|   id="D46ab96e6a753b"  class=" tableEdit Gene_accessions_table"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="D46ab96e6a753b"  class=" tableEdit Gene_accessions_table"   
|- {{table_heading_style}}
|- {{table_heading_style}}
!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
Line 197: Line 197:
|
|
   
   
|-
|
[[EcoCyc]]
|
EcoCyc:EG11568
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[EcoGene]]
|
EcoGene:EG11568
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[RegulonDB]]
|
RegulonDB:ECK120001520
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[EchoBASE]]
|
EchoBASE:EB1528
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[ASAP]]
|
ASAP:ABE-0000159
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  
Line 216: Line 251:
*  
*  
****************************************************************************************** -->
****************************************************************************************** -->
{|   id="J46a7e737546a5"  class=" tableEdit Links_table"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="J46a7e737546a5"  class=" tableEdit Links_table"   
|- {{table_heading_style}}
|- {{table_heading_style}}
!|Name!!URL!!Comments
!|Name!!URL!!Comments

Latest revision as of 08:29, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000000402 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000034446 (score: 1.000; bootstrap: 100%)
  • ENSAPMP00000022018 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000039940 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000032251 (score: 0.410)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000013713 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000030044 (score: 0.362)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-030131-1226 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-1145 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000020892 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000337773 (score: 1.000; bootstrap: 100%)
  • ENSP00000319788 (score: 0.359)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000011126 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000025865 (score: 0.360)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000003283 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Mus musculus

  • MGI:103187 (score: 1.000; bootstrap: 100%)
  • MGI:104513 (score: 0.320)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000030178 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000014148 (score: 0.361)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000017175 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000024141 (score: 0.338)
  • ENSRNOP00000033201 (score: 0.303)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000145774 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

YABF

From SHIGELLACYC

E. coli O157

YABF

From ECOO157CYC

edit table


Do-It-Yourself Web Tools


Notes

Families

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF02525 Flavodoxin-like fold

Superfamily (EcoliWiki Page)

SUPERFAMILY:52218

Panther (EcoliWiki Page)

PTHR10204:SF0

EcoCyc

EcoCyc:EG11568

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11568

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001520

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1528

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0000159

Escherichia coli str. K-12 substr. MG1655

edit table


Notes

Links

[back to top]



References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

[back to top]


Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=kefF:Evolution&oldid=1388846"