Template:GO table product: Difference between revisions

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<pre>
<headings>
<headings>
Qualifier||qualifier|select| |NOT|Contributes to|Colocalizes with
Qualifier||qualifier|select||NOT|Contributes to|Colocalizes with|Obsolete GO term|Under review|Deprecated
GO ID||go_id|text
GO ID||go_id|text
GO term name||go_term|lookupcalc|SELECT page_title FROM GO_archive.term WHERE go_id = '{{{go_id}}}' ORDER BY term_update DESC LIMIT 1|page_title|split|_!_|1
GO term name||go_term|GoTermLookup
Reference(s)||refs
Reference||refs|dbxref|unique|PMID|GO_REF|other
Evidence Code||evidence|select| |IC: Inferred by Curator|IDA: Inferred from Direct Assay|IEA: Inferred from Electronic Annotation|IEP: Inferred from Expression Pattern|IGC: Inferred from Genomic Context|IGI: Inferred from Genetic Interaction|IMP: Inferred from Mutant Phenotype|IPI: Inferred from Physical Interaction|ISS: Inferred from Sequence or Structural Similarity|ISO: Inferred from Sequence Orthology|ISA: Inferred from Sequence Alignment|ISM: Inferred from Sequence Model|IGC: Inferred from Genomic Context|RCA: inferred from Reviewed Computational Analysis|TAS: Traceable Author Statement|NAS: Non-traceable Author Statement|ND: No biological Data available|NR: Not Recorded
Evidence Code||evidence|select| |EXP: Inferred from Experiment|IDA: Inferred from Direct Assay|IPI: Inferred from Physical Interaction|IMP: Inferred from Mutant Phenotype|IGI: Inferred from Genetic Interaction|IEP: Inferred from Expression Pattern|ISS: Inferred from Sequence or Structural Similarity|ISO: Inferred from Sequence Orthology|ISA: Inferred from Sequence Alignment|ISM: Inferred from Sequence Model|IGC: Inferred from Genomic Context|IBA: Inferred from Biological Aspect of Ancestor|IBD: Inferred from Biological Aspect of Descendant|IKR: Inferred from Key Residues|IRD: Inferred from Rapid Divergence|RCA: inferred from Reviewed Computational Analysis|TAS: Traceable Author Statement|NAS: Non-traceable Author Statement|IC: Inferred by Curator|ND: No Biological Data Available|IEA: Inferred from Electronic Annotation
with/from||with|text
with/from||with|go_annotation|EcoliWiki|UniProtKB|InterPro|EcoCyc|GO|PMID|NCBI
Aspect||aspect|lookup|SELECT namespace from GO_archive.term WHERE go_id = '{{{go_id}}}' ORDER BY term_update DESC LIMIT 1|namespace
Aspect||aspect|AspectLookup
Notes||Notes
Notes||Notes
Status||status|calc|reqcomplete|go_id|refs|go_term|evidence
Status||status|go_annotation
</headings>
</headings>
<heading_style>{{table_heading_style}}</heading_style>
<heading_style>{{table_heading_style}}</heading_style>
[[Category:Table templates|GO table product]]
[[Category:Table templates|GO table product]]
<above>{{Product_GO_help}}</above>
<help1>{{Product_GO_help}}</help1>
<datatable>1</datatable>
</pre>
[[Category:Table_templates]]

Latest revision as of 18:38, 15 April 2013

<headings>
Qualifier||qualifier|select||NOT|Contributes to|Colocalizes with|Obsolete GO term|Under review|Deprecated
GO ID||go_id|text
GO term name||go_term|GoTermLookup
Reference||refs|dbxref|unique|PMID|GO_REF|other
Evidence Code||evidence|select| |EXP: Inferred from Experiment|IDA: Inferred from Direct Assay|IPI: Inferred from Physical Interaction|IMP: Inferred from Mutant Phenotype|IGI: Inferred from Genetic Interaction|IEP: Inferred from Expression Pattern|ISS: Inferred from Sequence or Structural Similarity|ISO: Inferred from Sequence Orthology|ISA: Inferred from Sequence Alignment|ISM: Inferred from Sequence Model|IGC: Inferred from Genomic Context|IBA: Inferred from Biological Aspect of Ancestor|IBD: Inferred from Biological Aspect of Descendant|IKR: Inferred from Key Residues|IRD: Inferred from Rapid Divergence|RCA: inferred from Reviewed Computational Analysis|TAS: Traceable Author Statement|NAS: Non-traceable Author Statement|IC: Inferred by Curator|ND: No Biological Data Available|IEA: Inferred from Electronic Annotation
with/from||with|go_annotation|EcoliWiki|UniProtKB|InterPro|EcoCyc|GO|PMID|NCBI
Aspect||aspect|AspectLookup
Notes||Notes
Status||status|go_annotation
</headings>
<heading_style>{{table_heading_style}}</heading_style>
[[Category:Table templates|GO table product]]
<above>{{Product_GO_help}}</above>
<help1>{{Product_GO_help}}</help1>
<datatable>1</datatable>