ilvG:Evolution: Difference between revisions

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==Homologs in Other Organisms==
==Homologs in Other Organisms==
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{|  id="N46ac0b966b6e4"  class=" tableEdit Evolution_homologs_table" 
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!Organism!!Homologs (Statistics)!!Comments
!|Organism!!Homologs (Statistics)!!Comments
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''Shigella flexneri''   
''Shigella flexneri''   
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From SHIGELLACYC  
From SHIGELLACYC  
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''E. coli'' O157
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ILVG
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From ECOO157CYC
 
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===Do-It-Yourself Web Tools===
<protect><!--Families_notes--></protect>
*[http://130.14.29.110/BLAST/ BLAST]
*[http://130.14.29.110/BLAST/Blast.cgi?CMD=Web&LAYOUT=TwoWindows&AUTO_FORMAT=Semiauto&ALIGNMENTS=250&ALIGNMENT_VIEW=Pairwise&CLIENT=web&COMPOSITION_BASED_STATISTICS=on&DATABASE=nr&CDD_SEARCH=on&DESCRIPTIONS=500&ENTREZ_QUERY=%28none%29&EXPECT=10&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&I_THRESH=0.005&MATRIX_NAME=BLOSUM62&NCBI_GI=on&PAGE=Proteins&PROGRAM=blastp&RUN_PSIBLAST=on&SERVICE=plain&SET_DEFAULTS.x=36&SET_DEFAULTS.y=5&SHOW_OVERVIEW=on&END_OF_HTTPGET=Yes&SHOW_LINKOUT=yes&GET_SEQUENCE=yes&SEARCH_NAME=psi_bp/ CDD]
*[http://inparanoid.sbc.su.se/cgi-bin/eid_search.pl?id=&idtype=all&start=on&species=All&conf=0.05 InParanoid]
*[http://www.sanger.ac.uk/PostGenomics/S_pombe/YOGY/ YOGY]
 
<protect><!--Homology_notes--></protect>
===Notes===
===Notes===


==Families==
==Families==
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{|  id="Y4c604e4869051"  class=" tableEdit Evolution_families_table" 
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!Organism!!Homologs (Statistics)!!Comments
!|Database!!Accession!!Notes
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00205 PF00205  Thiamine pyrophosphate enzyme, central domain]
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''Shigella flexneri'' 
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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ILVG
[http://pfam.janelia.org/family/PF02775 PF02775  Thiamine pyrophosphate enzyme, C-terminal TPP binding domain]
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From SHIGELLACYC
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''E. coli'' O157
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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ILVG
[http://pfam.janelia.org/family/PF02776 PF02776  Thiamine pyrophosphate enzyme, N-terminal TPP binding domain]
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From ECOO157CYC
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<protect><!--Families_notes--></protect>
===Notes===
===Notes===




==Links==
==Links==
{{Evolution_links_default}}
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==References==
==References==
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<references/>
<references />
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__NOTOC__
__NOTOC__
[[Category:Genes with homologs in Shigella flexneri ]][[Category:Genes with homologs in E. coli O157]]</noinclude>
===Categories===
{{BacktoTop}}
[[Category:Genes with homologs in Shigella flexneri ]]
[[Category:Genes with homologs in E. coli O157]]

Latest revision as of 22:55, 15 August 2011

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Shigella flexneri

ILVG

From SHIGELLACYC

E. coli O157

ILVG

From ECOO157CYC

edit table


Notes

Families

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See Help:Evolution_families for help entering or editing information in this section of EcoliWiki.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00205 Thiamine pyrophosphate enzyme, central domain

Pfam (EcoliWiki Page)

PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain

Pfam (EcoliWiki Page)

PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain


edit table


Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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