galS:Evolution: Difference between revisions

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{|  id="Z46abd2dc8c7a3"  class=" tableEdit Evolution_homologs_table" 
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!Organism!!Homologs (Statistics)!!Comments
!|Organism!!Homologs (Statistics)!!Comments
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''Apis mellifera''   
''Apis mellifera''   
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From Inparanoid:20070104  
From Inparanoid:20070104  
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''Shigella flexneri''   
''Shigella flexneri''   
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From SHIGELLACYC  
From SHIGELLACYC  
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''E. coli'' O157
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GALS
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From ECOO157CYC
 
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===Do-It-Yourself Web Tools===
<protect><!--Families_notes--></protect>
*[http://130.14.29.110/BLAST/ BLAST]
*[http://130.14.29.110/BLAST/Blast.cgi?CMD=Web&LAYOUT=TwoWindows&AUTO_FORMAT=Semiauto&ALIGNMENTS=250&ALIGNMENT_VIEW=Pairwise&CLIENT=web&COMPOSITION_BASED_STATISTICS=on&DATABASE=nr&CDD_SEARCH=on&DESCRIPTIONS=500&ENTREZ_QUERY=%28none%29&EXPECT=10&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&I_THRESH=0.005&MATRIX_NAME=BLOSUM62&NCBI_GI=on&PAGE=Proteins&PROGRAM=blastp&RUN_PSIBLAST=on&SERVICE=plain&SET_DEFAULTS.x=36&SET_DEFAULTS.y=5&SHOW_OVERVIEW=on&END_OF_HTTPGET=Yes&SHOW_LINKOUT=yes&GET_SEQUENCE=yes&SEARCH_NAME=psi_bp/ CDD]
*[http://inparanoid.sbc.su.se/cgi-bin/eid_search.pl?id=NP_416656&idtype=all&start=on&species=All&conf=0.05 InParanoid]
*[http://www.sanger.ac.uk/PostGenomics/S_pombe/YOGY/ YOGY]
 
<protect><!--Homology_notes--></protect>
===Notes===
===Notes===


==Families==
==Families==
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{|  id="K4c604e2001a28"  class=" tableEdit Evolution_families_table" 
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!Organism!!Homologs (Statistics)!!Comments
!|Database!!Accession!!Notes
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''Apis mellifera'' 
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* ENSAPMP00000033792 (score: 1.000; bootstrap: 100%)
* YP_026222 (score: 0.052)
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|
From Inparanoid:20070104
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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''Shigella flexneri''  
[http://pfam.janelia.org/family/PF00356 PF00356 Bacterial regulatory proteins, lacI family]
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GALS
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From SHIGELLACYC
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
|-
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''E. coli'' O157
[http://pfam.janelia.org/family/PF00532 PF00532  family]
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GALS
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From ECOO157CYC
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===Notes===
===Notes===


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==References==
==References==
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<references/>
<references />
<noinclude>
__NOTOC__
__NOTOC__
[[Category:Genes with homologs in Apis mellifera ]][[Category:Genes with homologs in Shigella flexneri ]][[Category:Genes with homologs in E. coli O157]]</noinclude>
===Categories===
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[[Category:Genes with homologs in Apis mellifera ]]
[[Category:Genes with homologs in Shigella flexneri ]]
[[Category:Genes with homologs in E. coli O157]]

Latest revision as of 22:30, 15 August 2011

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Apis mellifera

  • ENSAPMP00000033792 (score: 1.000; bootstrap: 100%)
  • YP_026222 (score: 0.052)

From Inparanoid:20070104

Shigella flexneri

GALS

From SHIGELLACYC

E. coli O157

GALS

From ECOO157CYC

edit table


Notes

Families

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See Help:Evolution_families for help entering or editing information in this section of EcoliWiki.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00356 Bacterial regulatory proteins, lacI family

Pfam (EcoliWiki Page)

PF00532 family


edit table


Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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