ProScan: Difference between revisions
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== Short Description == | |||
[[Image:ProScan.jpg|right|frameless|thumb|300px|ProScan]] | [[Image:ProScan.jpg|right|frameless|thumb|300px|ProScan]] | ||
{{UserContentHelp}} | {{UserContentHelp}} | ||
The ProScan tool allows for the quick and easy searching of protein sequences for a particular motif. The user provides a motif in the valid syntax and selects a file to search against, and the tool returns the matching sequences. EcoliWiki ProScan uses a local copy of the ps_scan program obtained from Swiss Institute of Bioinformatics. | The ProScan tool allows for the quick and easy searching of protein sequences for a particular motif. The user provides a motif in the valid syntax and selects a file to search against, and the tool returns the matching sequences. EcoliWiki ProScan uses a local copy of the ps_scan program obtained from Swiss Institute of Bioinformatics. | ||
== Links == | == Links == | ||
[http://ecoliwiki.net/tools/ProScan/ Proscan] | [http://ecoliwiki.net/tools/ProScan/ Proscan at EcoliWiki] | ||
== Requirements == | == Requirements == | ||
Latest revision as of 21:43, 17 June 2010
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Searching of protein sequences for a particular motif |
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Short Description
Share your knowledge and ideas. How you can help. See Help pages if you need help with using the wiki
The ProScan tool allows for the quick and easy searching of protein sequences for a particular motif. The user provides a motif in the valid syntax and selects a file to search against, and the tool returns the matching sequences. EcoliWiki ProScan uses a local copy of the ps_scan program obtained from Swiss Institute of Bioinformatics.
Links
Requirements
N/A
User notes
The results show the number of hits to genes in E. coli. Also, you can click on the gene names in the results to take you to the sequence information in Ecoliwiki.
See Also
References
See Help:References for how to manage references in EcoliWiki.