WormBase: Difference between revisions

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[[Category:Databases]][[Category:Animal Databases]][[Category:MODs]]
[[Category:Databases]][[Category:Animal Databases]][[Category:MODs]]
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<protect><!--box uid=63ce1649aab8b3180235b0af7618f667.1752.S4a249e55a65f4-->
|  colspan = '2' | '''{{PAGENAME}}'''
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|-
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| width='30%' | Who:
!align=left {{table heading style}} |Link/URL:
| ''proprietor''
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http://wormbase.org/
|-
|-
| width='30%' | What:
!align=left {{table heading style}} |What:
| ''short description''
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C. elegans genome information
|-
|-
| Where:
!align=left {{table heading style}} |Who:
| [http://www.wormbase.org {{PAGENAME}}]
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|-
|-
| Updates
!align=left {{table heading style}} |Updates:
|
||
 
|-
|-
| Upcoming events
!align=left {{table heading style}} |Upcoming events:
| ''link to event calendar, if applicable''
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|-
|-
| Web Services
!align=left {{table heading style}} |Web Services:
|
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RSS feeds:
* [http://www.wormbase.org/rss/wormbase-live.xml WormBase-live]
* [http://www.wormbase.org/rss/wormbase-dev.xml WormBase-dev]
* [http://www.wormbase.org/rss/wormmart.xml WormMart]
 
 
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=About {{PAGENAME}}=
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==About {{PAGENAME}}==
Wormbase provides information about the genetics, genomics and biology of C. elegans and some related nematodes.
Wormbase provides information about the genetics, genomics and biology of C. elegans and some related nematodes.


=Content=
==Content==


Sequences
Sequences
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Downloads and Data Mning
Downloads and Data Mning


=Using {{PAGENAME}}=
==Using {{PAGENAME}}==
==Browsing==
====Browsing====
==Searching==
====Searching====


Right when you get to the home page, you may search by:
Right when you get to the home page, you may search by:
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:*Y2H interaction
:*Y2H interaction


==Usage examples==
====Usage examples====
''Add links to additional pages describing success stories here.''
''Add links to additional pages describing success stories here.''


=Other sites with related content=
==Other sites with related content==
=Technology=
==Technology==
==Web Services/API==
====Web Services/API====
=Discussion=
==Discussion==


=References=
==References==
{{BacktoTop}}
{{RefHelp}}
<references />
'''WormBase: better software, richer content'''
'''WormBase: better software, richer content'''
Erich M. Schwarz1, ''et al'' (2006).
Erich M. Schwarz1, ''et al'' (2006).
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Lincoln D. Stein, Paul Sternberg, Richard Durbin, Jean Thierry-Mieg, and John Spieth (2001).
Lincoln D. Stein, Paul Sternberg, Richard Durbin, Jean Thierry-Mieg, and John Spieth (2001).
Nucleic Acids Research 29:82-86
Nucleic Acids Research 29:82-86
 
==External Links==
=External Links=
[http://www.wormbase.org {{PAGENAME}}] URL: http://www.wormbase.org
[http://www.wormbase.org {{PAGENAME}}] URL: http://www.wormbase.org
==Discussion of {{PAGENAME}} on other websites==
====Discussion of {{PAGENAME}} on other websites====

Latest revision as of 00:12, 23 May 2010

You can help EcoliWiki by editing the content of this page. For information about becoming a registered user and obtaining editing privileges, see Help:Accounts.

Link/URL:

http://wormbase.org/

What:

C. elegans genome information

Who:
Updates:
Upcoming events:
Web Services:

RSS feeds:


edit table


About WormBase

Wormbase provides information about the genetics, genomics and biology of C. elegans and some related nematodes.

Content

Sequences

  • C. elegans genome
  • C. briggsae genome
  • Gene Ontology
  • BLAST/ BLAT
  • e-PCR
  • Synteny Viewer
  • Cis Elements (Cis-ortho)

Cells and Gene Expression

  • Cell and Pedigree
  • Neurons
  • Expressoin Pattern
  • Expression Profile

Genetic Strans and Phenotypes

  • Genetic Interval
  • Rearrangements
  • Clone
  • Alleles
  • SNPs
  • Markers
  • Strains and Strain Reports
  • RNAi


Downloads and Data Mning

Using WormBase

Browsing

Searching

Right when you get to the home page, you may search by:

  • any gene
  • author
  • allele
  • cell
  • clone
  • database model
  • GO term
  • gene class
  • genetic map
  • Genbank accession number
  • literature search
  • microarray expression experiment
  • operon
  • primer pair
  • any protein
  • protein family or motif
  • RNAi experiment
  • any sequence
  • strains
  • Y2H interaction

Usage examples

Add links to additional pages describing success stories here.

Other sites with related content

Technology

Web Services/API

Discussion

References

[back to top]


See Help:References for how to manage references in EcoliWiki.

WormBase: better software, richer content Erich M. Schwarz1, et al (2006). Nucleic Acis Research 34:D475-D478

WormBase: a comprehensive data resource for Caenorhabditis biology and genomics Nansheng Chen, et al (2005). Nucleic Acids Research 33:D383-D389

WormBase: a multi-species resource for nematode biology and genomics Todd W. Harris, et al (2004). Nucleic Acids Research 32:D411-D417

WormBase: a cross-species database for comparative genomics Todd W. Harris, et al (2003). Nucleic Acids Research 31:133-137

WormBase: network access to the genome and biology of Caenorhabditis elegans Lincoln D. Stein, Paul Sternberg, Richard Durbin, Jean Thierry-Mieg, and John Spieth (2001). Nucleic Acids Research 29:82-86

External Links

WormBase URL: http://www.wormbase.org

Discussion of WormBase on other websites

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