zitB:Evolution

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Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000025703 (score: 1.000; bootstrap: 79%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000008903 (score: 1.000; bootstrap: 83%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT2G46800 (score: 1.000; bootstrap: 98%)
  • AT2G04620 (score: 1.000; bootstrap: 98%)
  • AT3G58810 (score: 0.588)
  • AT3G61940 (score: 0.506)
  • AT2G29410 (score: 0.255)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000014489 (score: 1.000; bootstrap: 53%)
  • ENSBTAP00000005787 (score: 0.118)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00035911 (score: 1.000; bootstrap: 69%)
  • WBGene00023597 (score: 0.216)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00012712 (score: 1.000; bootstrap: 69%)
  • WBGene00011821 (score: 0.217)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000018683 (score: 1.000; bootstrap: 88%)
  • ENSCAFP00000007210 (score: 0.344)
  • ENSCAFP00000001179 (score: 0.323)
  • ENSCAFP00000020244 (score: 0.177)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000003493 (score: 1.000; bootstrap: 73%)
  • ENSCINP00000008156 (score: 1.000; bootstrap: 70%)
  • ENSCINP00000014609 (score: 0.496)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040426-1840 (score: 1.000; bootstrap: 74%)
  • ZDB-CDNA-040425-2780 (score: 1.000; bootstrap: 73%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0185587 (score: 1.000; bootstrap: 87%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0025693 (score: 1.000; bootstrap: 65%)
  • FBgn0028516 (score: 0.095)
  • FBgn0051860 (score: 0.055)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA17830-PA (score: 1.000; bootstrap: 72%)
  • GA16530-PA (score: 0.356)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000025920 (score: 1.000; bootstrap: 59%)
  • ENSGALP00000016884 (score: 0.216)
  • ENSGALP00000009133 (score: 0.138)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000304030 (score: 1.000; bootstrap: 50%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000006583 (score: 1.000; bootstrap: 80%)
  • ENSMMUP00000016180 (score: 0.173)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000003320 (score: 1.000; bootstrap: 47%)
  • ENSMODP00000005329 (score: 0.096)

From Inparanoid:20070104

Mus musculus

  • MGI:1345281 (score: 1.000; bootstrap: 45%)
  • MGI:2685058 (score: 0.124)

From Inparanoid:20070104

Oryza gramene

  • Q688R1 (score: 1.000; bootstrap: 99%)
  • Q84NH0 (score: 0.994)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000035104 (score: 1.000; bootstrap: 81%)
  • ENSPTRP00000020201 (score: 0.247)
  • ENSPTRP00000000657 (score: 0.183)
  • ENSPTRP00000012029 (score: 0.159)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000006340 (score: 1.000; bootstrap: 53%)
  • ENSRNOP00000050013 (score: 0.121)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YMR243C (score: 1.000; bootstrap: 85%)
  • YOR316C (score: 0.455)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAC23C114 (score: 1.000; bootstrap: 72%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000181277 (score: 1.000; bootstrap: 45%)
  • NEWSINFRUP00000145481 (score: 0.263)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00009784001 (score: 1.000; bootstrap: 63%)
  • GSTENP00035764001 (score: 0.332)
  • GSTENP00008192001 (score: 0.321)
  • GSTENP00018089001 (score: 0.171)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000020187 (score: 1.000; bootstrap: 72%)
  • ENSXETP00000047719 (score: 0.185)

From Inparanoid:20070104

Shigella flexneri

YBGR

From SHIGELLACYC

E. coli O157

YBGR

From ECOO157CYC

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF01545 Cation efflux family

EcoCyc

EcoCyc:G6393

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG13662

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120002993

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB3426

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0002549

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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