yhjX:Evolution

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Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000014764 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000028913 (score: 1.000; bootstrap: 93%)
  • ENSAPMP00000016055 (score: 0.146)
  • ENSAPMP00000027765 (score: 0.094)
  • ENSAPMP00000013509 (score: 0.079)
  • ENSAPMP00000020267 (score: 0.055)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT5G50630 (score: 1.000; bootstrap: 100%)
  • AT5G50520 (score: 1.000; bootstrap: 100%)
  • AT5G14120 (score: 0.470)
  • AT3G01930 (score: 0.464)
  • AT2G39210 (score: 0.258)
  • AT2G16660 (score: 0.252)
  • AT2G28120 (score: 0.237)
  • AT4G34950 (score: 0.236)
  • AT1G80530 (score: 0.235)
  • AT1G74780 (score: 0.204)
  • AT2G34350 (score: 0.180)
  • AT1G18940 (score: 0.178)
  • AT2G34355 (score: 0.176)
  • AT4G19450 (score: 0.114)
  • AT5G45275 (score: 0.112)
  • AT1G31470 (score: 0.110)
  • AT3G01630 (score: 0.095)
  • AT2G30300 (score: 0.070)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000026369 (score: 1.000; bootstrap: 72%)
  • ENSBTAP00000013658 (score: 0.159)
  • ENSBTAP00000011068 (score: 0.103)
  • ENSBTAP00000012176 (score: 0.096)
  • ENSBTAP00000020444 (score: 0.092)
  • ENSBTAP00000027784 (score: 0.085)
  • ENSBTAP00000006118 (score: 0.080)
  • ENSBTAP00000003997 (score: 0.071)
  • ENSBTAP00000020102 (score: 0.070)
  • ENSBTAP00000000516 (score: 0.057)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00035021 (score: 1.000; bootstrap: 78%)
  • WBGene00036248 (score: 0.143)
  • WBGene00024394 (score: 0.106)
  • WBGene00029430 (score: 0.074)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00010834 (score: 1.000; bootstrap: 82%)
  • WBGene00021227 (score: 0.352)
  • WBGene00015273 (score: 0.351)
  • WBGene00015676 (score: 0.132)
  • WBGene00020168 (score: 0.108)
  • WBGene00008214 (score: 0.059)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000018320 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000015684 (score: 0.189)
  • ENSCAFP00000023505 (score: 0.103)
  • ENSCAFP00000029288 (score: 0.095)
  • ENSCAFP00000002062 (score: 0.090)
  • ENSCAFP00000016334 (score: 0.088)
  • ENSCAFP00000023507 (score: 0.085)
  • ENSCAFP00000010627 (score: 0.084)
  • ENSCAFP00000019692 (score: 0.060)
  • ENSCAFP00000005836 (score: 0.055)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000002493 (score: 1.000; bootstrap: 100%)
  • ENSCINP00000007886 (score: 0.067)
  • ENSCINP00000006674 (score: 0.062)
  • ENSCINP00000010538 (score: 0.058)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040426-1364 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-2298 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040801-76 (score: 0.566)
  • ZDB-GENE-040801-69 (score: 0.566)
  • ZDB-CDNA-051113-66 (score: 0.081)
  • ZDB-GENE-051113-248 (score: 0.081)
  • ZDB-CDNA-040425-2966 (score: 0.070)
  • ZDB-GENE-030131-5487 (score: 0.070)
  • ZDB-CDNA-050522-80 (score: 0.067)
  • ZDB-GENE-050522-80 (score: 0.067)
  • ZDB-CDNA-050706-47 (score: 0.060)
  • ZDB-GENE-050706-122 (score: 0.060)
  • ZDB-CDNA-040425-848 (score: 0.054)
  • ZDB-GENE-030515-5 (score: 0.054)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0231384 (score: 1.000; bootstrap: 97%)
  • DDB0217281 (score: 1.000; bootstrap: 97%)
  • DDB0217485 (score: 0.282)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0033095 (score: 1.000; bootstrap: 100%)
  • FBgn0023549 (score: 0.135)
  • FBgn0035173 (score: 0.124)
  • FBgn0033028 (score: 0.054)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA17432-PA (score: 1.000; bootstrap: 82%)
  • GA17462-PA (score: 0.144)
  • GA12617-PA (score: 0.130)
  • GA20945-PA (score: 0.072)
  • GA21099-PA (score: 0.065)
  • GA11129-PA (score: 0.059)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000005024 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000002800 (score: 0.684)
  • ENSGALP00000004563 (score: 0.179)
  • ENSGALP00000020054 (score: 0.114)
  • ENSGALP00000006606 (score: 0.104)
  • ENSGALP00000004297 (score: 0.101)
  • ENSGALP00000010348 (score: 0.089)
  • ENSGALP00000012273 (score: 0.073)
  • ENSGALP00000024210 (score: 0.071)
  • ENSGALP00000024215 (score: 0.061)
  • ENSGALP00000015862 (score: 0.059)
  • ENSGALP00000002631 (score: 0.059)
  • ENSGALP00000012547 (score: 0.058)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000298215 (score: 1.000; bootstrap: 100%)
  • ENSP00000295190 (score: 0.180)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000011685 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000011270 (score: 0.126)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000007657 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000007700 (score: 0.385)
  • ENSMODP00000005393 (score: 0.226)
  • ENSMODP00000009120 (score: 0.208)
  • ENSMODP00000002086 (score: 0.175)
  • ENSMODP00000004338 (score: 0.173)
  • ENSMODP00000026531 (score: 0.160)
  • ENSMODP00000025737 (score: 0.158)
  • ENSMODP00000001108 (score: 0.154)
  • ENSMODP00000008889 (score: 0.139)
  • ENSMODP00000017795 (score: 0.124)
  • ENSMODP00000022333 (score: 0.073)

From Inparanoid:20070104

Mus musculus

  • MGI:1914109 (score: 1.000; bootstrap: 100%)
  • MGI:1919031 (score: 0.189)

From Inparanoid:20070104

Oryza gramene

  • Q8S746 (score: 1.000; bootstrap: 100%)
  • Q7XGH1 (score: 1.000; bootstrap: 100%)
  • Q851R0 (score: 0.569)
  • Q6Z4F2 (score: 0.537)
  • Q7Y003 (score: 0.499)
  • Q5BHT8 (score: 0.226)
  • Q5BHS6 (score: 0.225)
  • Q5URW8 (score: 0.223)
  • Q5BHR7 (score: 0.223)
  • Q5BHT4 (score: 0.219)
  • Q5BHT0 (score: 0.219)
  • Q6YZD9 (score: 0.204)
  • Q69JG4 (score: 0.181)
  • Q6ZG27 (score: 0.152)
  • Q8H613 (score: 0.126)
  • Q7XQX2 (score: 0.125)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000004344 (score: 1.000; bootstrap: 94%)
  • ENSPTRP00000022240 (score: 0.180)
  • ENSPTRP00000014770 (score: 0.100)
  • ENSPTRP00000024730 (score: 0.098)
  • ENSPTRP00000031604 (score: 0.092)
  • ENSPTRP00000014771 (score: 0.078)
  • ENSPTRP00000004783 (score: 0.077)
  • ENSPTRP00000016264 (score: 0.068)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000035453 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000016248 (score: 0.293)
  • ENSRNOP00000010379 (score: 0.257)
  • ENSRNOP00000027234 (score: 0.203)
  • ENSRNOP00000038838 (score: 0.167)
  • ENSRNOP00000025372 (score: 0.155)
  • ENSRNOP00000000262 (score: 0.130)
  • ENSRNOP00000022982 (score: 0.129)
  • ENSRNOP00000025403 (score: 0.115)
  • ENSRNOP00000024455 (score: 0.065)
  • ENSRNOP00000000718 (score: 0.059)
  • ENSRNOP00000003893 (score: 0.056)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YMR155W (score: 1.000; bootstrap: 61%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000173381 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000141514 (score: 0.108)
  • NEWSINFRUP00000142591 (score: 0.106)
  • NEWSINFRUP00000154342 (score: 0.092)
  • NEWSINFRUP00000129089 (score: 0.077)
  • NEWSINFRUP00000171097 (score: 0.073)
  • NEWSINFRUP00000147834 (score: 0.069)
  • NEWSINFRUP00000133236 (score: 0.065)
  • NEWSINFRUP00000163016 (score: 0.063)
  • NEWSINFRUP00000148881 (score: 0.057)
  • NEWSINFRUP00000165004 (score: 0.056)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00010505001 (score: 1.000; bootstrap: 79%)
  • GSTENP00024133001 (score: 0.229)
  • GSTENP00002330001 (score: 0.121)
  • GSTENP00033881001 (score: 0.118)
  • GSTENP00019654001 (score: 0.102)
  • GSTENP00021011001 (score: 0.095)
  • GSTENP00005955001 (score: 0.085)
  • GSTENP00028171001 (score: 0.083)
  • GSTENP00014294001 (score: 0.081)
  • GSTENP00031582001 (score: 0.077)
  • GSTENP00011391001 (score: 0.074)
  • GSTENP00013277001 (score: 0.054)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000048730 (score: 1.000; bootstrap: 100%)
  • ENSXETP00000011138 (score: 1.000; bootstrap: 100%)
  • ENSXETP00000030496 (score: 0.179)
  • ENSXETP00000042639 (score: 0.139)
  • ENSXETP00000002722 (score: 0.116)
  • ENSXETP00000037493 (score: 0.099)
  • ENSXETP00000046146 (score: 0.098)
  • ENSXETP00000046440 (score: 0.098)
  • ENSXETP00000027342 (score: 0.086)

From Inparanoid:20070104

Shigella flexneri

YHJX

From SHIGELLACYC

E. coli O157

YHJX

From ECOO157CYC

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Panther (EcoliWiki Page)

PTHR11360:SF54

Superfamily (EcoliWiki Page)

SUPERFAMILY:103473

Pfam (EcoliWiki Page)

PF07690 Major Facilitator Superfamily

EcoCyc

EcoCyc:EG12268

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12268

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120002149

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2177

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0011586

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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Categories

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