ybdL:Evolution

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Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000022034 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT1G77670 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000025004 (score: 1.000; bootstrap: 99%)
  • ENSBTAP00000000643 (score: 0.329)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00031645 (score: 1.000; bootstrap: 100%)
  • WBGene00031679 (score: 1.000; bootstrap: 100%)
  • WBGene00029668 (score: 0.507)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00010984 (score: 1.000; bootstrap: 100%)
  • WBGene00009232 (score: 0.515)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000029972 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000029678 (score: 0.363)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040426-1299 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-2233 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-3623 (score: 0.075)
  • ZDB-GENE-040426-2676 (score: 0.075)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0231138 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0037955 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA19977-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000007314 (score: 1.000; bootstrap: 99%)
  • ENSGALP00000009970 (score: 0.438)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000302227 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000028769 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000024741 (score: 0.100)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000015537 (score: 1.000; bootstrap: 99%)
  • ENSMODP00000008046 (score: 0.375)

From Inparanoid:20070104

Mus musculus

  • MGI:2677849 (score: 1.000; bootstrap: 99%)
  • MGI:1917516 (score: 0.376)

From Inparanoid:20070104

Oryza gramene

  • Q67UZ0 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000036664 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000021865 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YJL060W (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAC6B124c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000158537 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000155898 (score: 0.455)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00014385001 (score: 1.000; bootstrap: 100%)
  • GSTENP00025714001 (score: 0.243)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000044909 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Shigella flexneri

YBDL

From SHIGELLACYC

E. coli O157

YBDL

From ECOO157CYC


Do-It-Yourself Web Tools

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00155 Aminotransferase class I and II

Panther (EcoliWiki Page)

PTHR11751:SF37

Superfamily (EcoliWiki Page)

SUPERFAMILY:53383

EcoCyc

EcoCyc:G6329

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG13531

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120002936

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB3302

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0002069

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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